RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DMP1Q13316 513 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-205ENST00000440514 PCBP1Q15365 356 aaKnown RBP eCLIP19.91■□□□□ 0.78
CPSF4-205ENST00000440514 CLLU1OSQ5K130 101 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 PPP4R3CPQ6ZMV5 832 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 GDPD5Q8WTR4 605 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 LEO1Q8WVC0 666 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-205ENST00000440514 LPPQ93052 612 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 EIF2AQ9BY44 585 aaKnown RBP19.91■□□□□ 0.78
CPSF4-205ENST00000440514 FZD8Q9H461 694 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-205ENST00000440514 HCSTQ9UBK5 93 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 RCOR1Q9UKL0 485 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 CNTNAP2Q9UHC6 1331 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 MEIS3P2A8K0S8 358 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 SLC34A2O95436 690 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 KRT18P05783 430 aaKnown RBP19.9■□□□□ 0.78
CPSF4-205ENST00000440514 LINC00271P0C7V0 271 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 FOSL2P15408 326 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 AXLP30530 894 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 MAPK6Q16659 721 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 NOTUMQ6P988 496 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 CCDC73Q6ZRK6 1079 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 HELQQ8TDG4 1101 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 SPATA32Q96LK8 384 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 PRIMPOLQ96LW4 560 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 KMT5AQ9NQR1 393 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 PCDHB2Q9Y5E7 798 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 ATP6V1DQ9Y5K8 247 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 PHLPP2Q6ZVD8 1323 aa19.9■□□□□ 0.78
CPSF4-205ENST00000440514 SLC16A4O15374 487 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 PLS3P13797 630 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 CTNNB1P35222 781 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 ANP32AP39687 249 aaKnown RBP19.89■□□□□ 0.77
CPSF4-205ENST00000440514 NUCB2P80303 420 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 TCHHQ07283 1943 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 ADGRE1Q14246 886 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 FAM187BQ17R55 369 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 FBXO22Q8NEZ5 403 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 CCDC51Q96ER9 411 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 ARHGAP28Q9P2N2 729 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 ODF2LQ9ULJ1 636 aa19.89■□□□□ 0.77
CPSF4-205ENST00000440514 HOXA2O43364 376 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 TBCAO75347 108 aaKnown RBP19.88■□□□□ 0.77
CPSF4-205ENST00000440514 NPTXRO95502 500 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 EOMESO95936 686 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 SKIP12755 728 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 EFNA5P52803 228 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 NCBP1Q09161 790 aaKnown RBP19.88■□□□□ 0.77
CPSF4-205ENST00000440514 PRPF4BQ13523 1007 aaKnown RBP19.88■□□□□ 0.77
CPSF4-205ENST00000440514 GIT2Q14161 759 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 E2F4Q16254 413 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 TMEM132AQ24JP5 1023 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 EPC2Q52LR7 807 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 RESP18Q5W5W9 173 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 DYMQ7RTS9 669 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 TAS1R3Q7RTX0 852 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 TMEM192Q8IY95 271 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 ABI1Q8IZP0 508 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
CPSF4-205ENST00000440514 DHX58Q96C10 678 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 CASD1Q96PB1 797 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 GAS2L1Q99501 681 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-205ENST00000440514 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 ZHX3Q9H4I2 956 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 PDZD7Q9H5P4 517 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 C17orf75Q9HAS0 396 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 CHD7Q9P2D1 2997 aa19.88■□□□□ 0.77
CPSF4-205ENST00000440514 A0A1B0GUA9 196 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 MYMKA6NI61 221 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 ACKR2O00590 384 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 ZNF623O75123 536 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 FAM13AO94988 1023 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 SLC27A1Q6PCB7 646 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 SV2BQ7L1I2 683 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 SPIRE2Q8WWL2 714 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
CPSF4-205ENST00000440514 SAMD11Q96NU1 681 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 NXF3Q9H4D5 531 aaKnown RBP19.87■□□□□ 0.77
CPSF4-205ENST00000440514 GDPD2Q9HCC8 539 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 INPP5FQ9Y2H2 1132 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 STXBP5LQ9Y2K9 1186 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 HES2Q9Y543 173 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 IPPQ9Y573 584 aa19.87■□□□□ 0.77
CPSF4-205ENST00000440514 K7ERI5 159 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 LPXNO60711 386 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 IGFBP4P22692 258 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 ZNF131P52739 623 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 NT5DC1Q5TFE4 455 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 EEF1DP3Q658K8 133 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 AGMOQ6ZNB7 445 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 MRPL10Q7Z7H8 261 aaKnown RBP19.86■□□□□ 0.77
CPSF4-205ENST00000440514 LRRC43Q8N309 656 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 MYCT1Q8N699 235 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 TMEM161BQ8NDZ6 487 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 STAMQ92783 540 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 PGBD4Q96DM1 585 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 APOL6Q9BWW8 343 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 TRIM6Q9C030 488 aaPredicted RBP19.86■□□□□ 0.77
CPSF4-205ENST00000440514 PARVGQ9HBI0 331 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 TYW1Q9NV66 732 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms