RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 ORC2Q13416 577 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 ANKRD54Q6NXT1 300 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 MRPL43Q8N983 215 aaKnown RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 IGSF21Q96ID5 467 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 ZSCAN31Q96LW9 406 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 S1PR5Q9H228 398 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 FOXP1Q9H334 677 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 RSAD1Q9HA92 442 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-204ENST00000440437 DNAJB4Q9UDY4 337 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 CNTNAP2Q9UHC6 1331 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 LOC730098B7Z3J9 87 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 ERLIN2O94905 339 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 SRGAP2BP0DMP2 458 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 ATP2B1P20020 1258 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 GLRA2P23416 452 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 AXLP30530 894 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 SLC11A1P49279 550 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 AFF1P51825 1210 aaKnown RBP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 MBTD1Q05BQ5 628 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 TFDP1Q14186 410 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 CBX2Q14781 532 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 AMHR2Q16671 573 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 HERC4Q5GLZ8 1057 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 SYCE2Q6PIF2 218 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 SMG8Q8ND04 991 aaKnown RBP18.7■□□□□ 0.58
COL16A1-204ENST00000440437 FBXO18Q8NFZ0 1043 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 NFKBIZQ9BYH8 718 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 TUFT1Q9NNX1 390 aa18.7■□□□□ 0.58
COL16A1-204ENST00000440437 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 A0A087WWV3 80 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 USO1O60763 962 aaKnown RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 MED24O75448 989 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 DDHD2O94830 711 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 TECP42680 631 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 RNASELQ05823 741 aaKnown RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 LLGL2Q6P1M3 1020 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 DDX53Q86TM3 631 aaKnown RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 CATSPER3Q86XQ3 398 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 VPS52Q8N1B4 723 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 CNNM3Q8NE01 707 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 URGCPQ8TCY9 931 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 CCDC51Q96ER9 411 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 CCDC43Q96MW1 224 aaKnown RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 PHF7Q9BWX1 381 aaPredicted RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 VN1R3Q9BXE9 311 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
COL16A1-204ENST00000440437 GBP3Q9H0R5 595 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 MUTYHQ9UIF7 546 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 IPPQ9Y573 584 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 HCFC2Q9Y5Z7 792 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 IRAK3Q9Y616 596 aa18.69■□□□□ 0.58
COL16A1-204ENST00000440437 INO80B-WBP1J3KQ70 363 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 INPPL1O15357 1258 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 CLASP2O75122 1294 aaKnown RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 CTSAP10619 480 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 NOTUMQ6P988 496 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 NOSTRINQ8IVI9 506 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 CASP10Q92851 521 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 CPB2Q96IY4 423 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 CSRNP2Q9H175 543 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 POLR3FQ9H1D9 316 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 DBR1Q9UK59 544 aaKnown RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 HCN4Q9Y3Q4 1203 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-204ENST00000440437 TRIOO75962 3097 aa18.68■□□□□ 0.58
COL16A1-204ENST00000440437 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-204ENST00000440437 HOXB8P17481 243 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-204ENST00000440437 ARF4P18085 180 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-204ENST00000440437 ZNF174Q15697 407 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 TTC38Q5R3I4 469 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 AUTS2Q8WXX7 1259 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 TMEM175Q9BSA9 504 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 KANSL3Q9P2N6 904 aa18.67■□□□□ 0.58
COL16A1-204ENST00000440437 TECTAO75443 2155 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 CXCL14O95715 111 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 ITGA4P13612 1032 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 RPA1P27694 616 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 PLA2G5P39877 138 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 TRAPPC10P48553 1259 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 GIT2Q14161 759 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
COL16A1-204ENST00000440437 POTEGQ6S5H5 508 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 C4orf32Q8N8J7 132 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 FAM184AQ8NB25 1140 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 APOL5Q9BWW9 433 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 UBN1Q9NPG3 1134 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 PLXNA3P51805 1871 aa18.66■□□□□ 0.58
COL16A1-204ENST00000440437 C2orf16Q68DN1 1984 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms