RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SMAD4Q13485 552 aaKnown RBP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 TMEM132AQ24JP5 1023 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 HACE1Q8IYU2 909 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 GJD3Q8N144 294 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 SLC39A11Q8N1S5 342 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 TMEM87AQ8NBN3 555 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 CCDC51Q96ER9 411 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 CDCA3Q99618 268 aaPredicted RBP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 NGRNQ9NPE2 291 aaKnown RBP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 TBC1D13Q9NVG8 400 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 LRWD1Q9UFC0 647 aa22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 DBR1Q9UK59 544 aaKnown RBP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 BARX2Q9UMQ3 279 aaPredicted RBP22.03■■□□□ 1.12
SHROOM1-204ENST00000440118 MEIS3P2A8K0S8 358 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 NT5C1B-RDH14C9J2C7 533 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 TSPAN1O60635 241 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 ITGA4P13612 1032 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 GLRA2P23416 452 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 RPA1P27694 616 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 GJB2P29033 226 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 ARL2P36404 184 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 FXR2P51116 673 aaKnown RBP eCLIP22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 ZBTB8OSQ8IWT0 167 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 CNNM3Q8NE01 707 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 CPB2Q96IY4 423 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 GPRC5CQ9NQ84 441 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 SMC3Q9UQE7 1217 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 STK24Q9Y6E0 443 aa22.02■■□□□ 1.12
SHROOM1-204ENST00000440118 FSCN2O14926 492 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 OFD1O75665 1012 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 HOXA11P31270 313 aaPredicted RBP22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 MBTD1Q05BQ5 628 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 PTGDRQ13258 359 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 SMC1AQ14683 1233 aaKnown RBP22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 DUSP6Q16828 381 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 PADI6Q6TGC4 694 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 SNX29Q8TEQ0 813 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 TBC1D32Q96NH3 1257 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 POP1Q99575 1024 aaKnown RBP22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 APOL6Q9BWW8 343 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 C1QTNF1Q9BXJ1 281 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 PCDHB6Q9Y5E3 794 aa22.01■■□□□ 1.11
SHROOM1-204ENST00000440118 LAD1O00515 517 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 MBTPS2O43462 519 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 POU5F1BQ06416 359 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 UBN1Q9NPG3 1134 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 KANSL3Q9P2N6 904 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 PRKAG3Q9UGI9 489 aa22■■□□□ 1.11
SHROOM1-204ENST00000440118 ZSCAN21Q9Y5A6 473 aaPredicted RBP22■■□□□ 1.11
SHROOM1-204ENST00000440118 CD2BP2O95400 341 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 LIG1P18858 919 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 NCLP19338 710 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 SMAD2Q15796 467 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 RILPL1Q5EBL4 403 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 UBXN11Q5T124 520 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 LLGL2Q6P1M3 1020 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 AGMOQ6ZNB7 445 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 IFNLR1Q8IU57 520 aaPredicted RBP21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 EIF2AQ9BY44 585 aaKnown RBP21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 NFKBIZQ9BYH8 718 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 CSRNP2Q9H175 543 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 NRDE2Q9H7Z3 1164 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 KIAA1024Q9UPX6 916 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 IPPQ9Y573 584 aa21.99■■□□□ 1.11
SHROOM1-204ENST00000440118 HIDE1A8MVS5 230 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 GLP2RO95838 553 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 POMCP01189 267 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 ARF4P18085 180 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 MUTP22033 750 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 TOB1P50616 345 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 PPP2R5AQ15172 486 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 KRT79Q5XKE5 535 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 DTHD1Q6ZMT9 781 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 ADHFE1Q8IWW8 467 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 VPS52Q8N1B4 723 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 DEPTORQ8TB45 409 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 C2orf40Q9H1Z8 148 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 BHMT2Q9H2M3 363 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 DDX19AQ9NUU7 478 aaKnown RBP21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 PRMT7Q9NVM4 692 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 CLEC1BQ9P126 229 aa21.98■■□□□ 1.11
SHROOM1-204ENST00000440118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 B4GALT5O43286 388 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 MLH1P40692 756 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 ZP2Q05996 745 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 COASYQ13057 564 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 ZRSR1Q15695 479 aaKnown RBP21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 IGSF21Q96ID5 467 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 MSLNLQ96KJ4 702 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 IFT74Q96LB3 600 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 CD320Q9NPF0 282 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 DNAJB4Q9UDY4 337 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 HES2Q9Y543 173 aa21.97■■□□□ 1.11
SHROOM1-204ENST00000440118 NPTXRO95502 500 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 GALTP07902 379 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 CYP11B2P19099 503 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 SLC11A1P49279 550 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 RBM10P98175 930 aaKnown RBP21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 PDIA5Q14554 519 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms