RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CTAGE8P0CG41 777 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 ARL2P36404 184 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 NAMPTP43490 491 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 STAT5BP51692 787 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-202ENST00000439724 NAB2Q15742 525 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
SMAD3-202ENST00000439724 TAS1R3Q7RTX0 852 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 CTAGE6Q86UF2 777 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 VPS36Q86VN1 386 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 CTAGE4Q8IX94 777 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 ZSWIM2Q8NEG5 633 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 FAM167AQ96KS9 214 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 NOX5Q96PH1 765 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 NRBP2Q9NSY0 501 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
SMAD3-202ENST00000439724 DDX41Q9UJV9 622 aaKnown RBP12.8□□□□□ -0.36
SMAD3-202ENST00000439724 MYH10P35580 1976 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 GOLGA8IPA6NC78 632 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 GOLGA8JA6NMD2 632 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 MCM3APO60318 1980 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 EVI5O60447 810 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 PIGRP01833 764 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 PRLRP16471 622 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 MXI1P50539 228 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 BMS1Q14692 1282 aaKnown RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 ENOX2Q16206 610 aaKnown RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 SLC7A3Q8WY07 619 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 ARGLU1Q9NWB6 273 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-202ENST00000439724 HDAC6Q9UBN7 1215 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 NAGPAQ9UK23 515 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
SMAD3-202ENST00000439724 HNRNPDLO14979 420 aaKnown RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ARIH2O95376 493 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CETPP11597 493 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GLRA2P23416 452 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 KLRC1P26715 233 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GTF2H1P32780 548 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GCLMP48507 274 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 FKBP1BP68106 108 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CYP24A1Q07973 514 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 KIF22Q14807 665 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CELF3Q5SZQ8 465 aaKnown RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 PHLDB3Q6NSJ2 640 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CCDC62Q6P9F0 684 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 EEPD1Q7L9B9 569 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 USP37Q86T82 979 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GPD1LQ8N335 351 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 TMEM143Q96AN5 459 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 SAAL1Q96ER3 474 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GPR20Q99678 358 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 TMEM8AQ9HCN3 771 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 PCDHGC5Q9Y5F6 944 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 STYXL1Q9Y6J8 313 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ASB14A6NK59 587 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 MAFO75444 373 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ZSCAN20P17040 1043 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CLCN6P51797 869 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GTF2A2P52657 109 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CCNA1P78396 465 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 STRN3Q13033 797 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 LY6KQ17RY6 165 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 KRT39Q6A163 491 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ALKBH5Q6P6C2 394 aaKnown RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 SLC30A5Q8TAD4 765 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 BICD1Q96G01 975 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-202ENST00000439724 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 AZI2Q9H6S1 392 aa12.78□□□□□ -0.36
SMAD3-202ENST00000439724 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms