RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC8A3P57103 927 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 ARHGAP4P98171 946 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 MTM1Q13496 603 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 NFIXQ14938 502 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 RBBP5Q15291 538 aaKnown RBP9.72□□□□□ -0.85
COPB1-202ENST00000439561 KAZNQ674X7 775 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 DUPD1Q68J44 220 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
COPB1-202ENST00000439561 RHOT2Q8IXI1 618 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 SLC30A5Q8TAD4 765 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
COPB1-202ENST00000439561 TLCD1Q96CP7 247 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 PGM2Q96G03 612 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 SH2D3AQ9BRG2 576 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 ACP6Q9NPH0 428 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 DCTN4Q9UJW0 460 aa9.72□□□□□ -0.85
COPB1-202ENST00000439561 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.72□□□□□ -0.85
COPB1-202ENST00000439561 LRP6O75581 1613 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 DUOX1Q9NRD9 1551 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 GOLGA8IPA6NC78 632 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 GOLGA8JA6NMD2 632 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 PDXKO00764 312 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 ZBTB5O15062 677 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 IFNB1P01574 187 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 AUHQ13825 339 aaKnown RBP9.71□□□□□ -0.85
COPB1-202ENST00000439561 GIT2Q14161 759 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 EPHA7Q15375 998 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 QRICH1Q2TAL8 776 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 COBLL1Q53SF7 1204 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 EXOC3L1Q86VI1 746 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 EIF1ADQ8N9N8 165 aaKnown RBP9.71□□□□□ -0.85
COPB1-202ENST00000439561 MCUR1Q96AQ8 359 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 HES6Q96HZ4 224 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 STK33Q9BYT3 514 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 TXLNGQ9NUQ3 528 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 MTMR4Q9NYA4 1195 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 TTC7AQ9ULT0 858 aaPredicted RBP9.71□□□□□ -0.85
COPB1-202ENST00000439561 SIPA1L3O60292 1781 aaPredicted RBP9.71□□□□□ -0.85
COPB1-202ENST00000439561 CAMTA1Q9Y6Y1 1673 aa9.71□□□□□ -0.85
COPB1-202ENST00000439561 K7ENM7 598 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 CA4P22748 312 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 GPC5P78333 572 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 STRN3Q13033 797 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 ZRSR2Q15696 482 aaKnown RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 THEMIS2Q5TEJ8 643 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 VPS52Q8N1B4 723 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 LRRC8CQ8TDW0 803 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 ATP8B4Q8TF62 1192 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 ATXN2LQ8WWM7 1075 aaKnown RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 ZNF317Q96PQ6 595 aaPredicted RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 LRRC37BQ96QE4 947 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 AGPAT1Q99943 283 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 NUP85Q9BW27 656 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 TJP1Q07157 1748 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 TCRBV7S2A1N4TA0A589 114 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 ARHGEF35A5YM69 484 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 PAEPP09466 180 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 PYGMP11217 842 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 RWDD2BP57060 319 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 SCYL3Q8IZE3 742 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 C4orf33Q8N1A6 199 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 PRELID2Q8N945 189 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 PARD3BQ8TEW8 1205 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 STMN2Q93045 179 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 FAXDC2Q96IV6 333 aa9.71□□□□□ -0.86
COPB1-202ENST00000439561 NAP1L4Q99733 375 aaKnown RBP9.71□□□□□ -0.86
COPB1-202ENST00000439561 ECM29Q5VYK3 1845 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 COL5A2P05997 1499 aaPredicted RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 ANKRD63C9JTQ0 380 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 RARAP10276 462 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 HSPA6P17066 643 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 COILP38432 576 aaPredicted RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 CACNB3P54284 484 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CLUL1Q15846 466 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 C2CD6Q53TS8 623 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 EMC10Q5UCC4 262 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 C16orf86Q6ZW13 317 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 DTX3LQ8TDB6 740 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 NAF1Q96HR8 494 aaKnown RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 PARVGQ9HBI0 331 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 ALG13Q9NP73 1137 aaKnown RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 DIS3Q9Y2L1 958 aaKnown RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 ESYT2A0FGR8 921 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 ZBTB39O15060 712 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 RARGP13631 454 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CTNNA2P26232 953 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 SSTR3P32745 418 aaPredicted RBP9.7□□□□□ -0.86
COPB1-202ENST00000439561 KLRC3Q07444 240 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 ZNF543Q08ER8 600 aa9.7□□□□□ -0.86
COPB1-202ENST00000439561 CBWD6Q4V339 395 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms