RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MUTYHQ9UIF7 546 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 POTEMA6NI47 508 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 WNT7AO00755 349 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 CXCL14O95715 111 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 HOXB8P17481 243 aaPredicted RBP20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 AXLP30530 894 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 HMGN5P82970 282 aaKnown RBP20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 TPRNQ4KMQ1 711 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 NOTUMQ6P988 496 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 MRPL10Q7Z7H8 261 aaKnown RBP20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 PIGOQ8TEQ8 1089 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 IGSF21Q96ID5 467 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 RPGRIP1Q96KN7 1286 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 ZSCAN31Q96LW9 406 aaPredicted RBP20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 APOL5Q9BWW9 433 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 UBN1Q9NPG3 1134 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 XPNPEP1Q9NQW7 623 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 KANSL3Q9P2N6 904 aa20.52■□□□□ 0.88
AC004540.1-201ENST00000439120 C2orf71A6NGG8 1288 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 GALTP07902 379 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 ITGA4P13612 1032 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 HOXA11P31270 313 aaPredicted RBP20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 PLA2G5P39877 138 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 RARRES1P49788 294 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 PTENP60484 403 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 GIT2Q14161 759 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 CBX2Q14781 532 aaPredicted RBP20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 HERC4Q5GLZ8 1057 aaPredicted RBP20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 AGMOQ6ZNB7 445 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 DDX53Q86TM3 631 aaKnown RBP20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 ERMNQ8TAM6 284 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 CCDC51Q96ER9 411 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 TRIM6Q9C030 488 aaPredicted RBP20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 DNAJB4Q9UDY4 337 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 HCFC2Q9Y5Z7 792 aa20.51■□□□□ 0.87
AC004540.1-201ENST00000439120 TSPAN1O60635 241 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 USO1O60763 962 aaKnown RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 XRCC6P12956 609 aaKnown RBP eCLIP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 NCLP19338 710 aaKnown RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 SLC11A1P49279 550 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 POU5F1BQ06416 359 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 KCNC3Q14003 757 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 UBXN11Q5T124 520 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 CES5AQ6NT32 575 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 TMEM173Q86WV6 379 aaPredicted RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 HACE1Q8IYU2 909 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 ASAP3Q8TDY4 903 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 SUSD6Q92537 303 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 ZBP1Q9H171 429 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 POLR3FQ9H1D9 316 aaPredicted RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 TMEM60Q9H2L4 133 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 TUFT1Q9NNX1 390 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 SH2B1Q9NRF2 756 aaPredicted RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 STK39Q9UEW8 545 aa20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 ARIH1Q9Y4X5 557 aaPredicted RBP20.5■□□□□ 0.87
AC004540.1-201ENST00000439120 LOC730098B7Z3J9 87 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 CLASP2O75122 1294 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 POMCP01189 267 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 OR52Z1P0C646 297 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 RBM25P49756 843 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 ORC2Q13416 577 aaPredicted RBP20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 CAPSQ13938 189 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 ZNF280BQ86YH2 543 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 AUTS2Q8WXX7 1259 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 CPB2Q96IY4 423 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 IPPQ9Y573 584 aa20.49■□□□□ 0.87
AC004540.1-201ENST00000439120 A0A087WWV3 80 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 ALDH2P05091 517 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 CTSAP10619 480 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 ARL2P36404 184 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 MBTD1Q05BQ5 628 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 ZNF174Q15697 407 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 MAEAQ7L5Y9 396 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 IFNLR1Q8IU57 520 aaPredicted RBP20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 MCPH1Q8NEM0 835 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 TMEM175Q9BSA9 504 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 CSRNP2Q9H175 543 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 S1PR5Q9H228 398 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 FAN1Q9Y2M0 1017 aa20.48■□□□□ 0.87
AC004540.1-201ENST00000439120 LRRIQ4A6NIV6 560 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 SPDYE4A6NLX3 237 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 DDHD2O94830 711 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 GLRA2P23416 452 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 ITIH3Q06033 890 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 CATSPER3Q86XQ3 398 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 NOSTRINQ8IVI9 506 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 SMG8Q8ND04 991 aaKnown RBP20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 BCL7CQ8WUZ0 217 aaPredicted RBP20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 APOL6Q9BWW8 343 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 EIF2AQ9BY44 585 aaKnown RBP20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 NFKBIZQ9BYH8 718 aa20.47■□□□□ 0.87
AC004540.1-201ENST00000439120 DZANK1Q9NVP4 752 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms