RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SDSP20132 328 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 HTR4Q13639 388 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
CSTF3-203ENST00000438862 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
CSTF3-203ENST00000438862 NELL2Q99435 816 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 SPZ1Q9BXG8 430 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 CHST12Q9NRB3 414 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 FAM170BA6NMN3 283 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
CSTF3-203ENST00000438862 NCAM2O15394 837 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 FOXD2O60548 495 aaPredicted RBP12.64□□□□□ -0.39
CSTF3-203ENST00000438862 C1RP00736 705 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 ADH1AP07327 375 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 TMOD1P28289 359 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 GPC5P78333 572 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 SHC2P98077 582 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 NUCB1Q02818 461 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 RNASELQ05823 741 aaKnown RBP12.64□□□□□ -0.39
CSTF3-203ENST00000438862 SPEM2Q0P670 501 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 TRDNQ13061 729 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 SNW1Q13573 536 aaKnown RBP12.64□□□□□ -0.39
CSTF3-203ENST00000438862 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 GLB1LQ6UWU2 654 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 MAP7D2Q96T17 732 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 ADAMTS10Q9H324 1103 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 TBC1D13Q9NVG8 400 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 CEP131Q9UPN4 1083 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 NUMBLQ9Y6R0 609 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
CSTF3-203ENST00000438862 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 MAP3K7O43318 606 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 ALDH2P05091 517 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 KIF5BP33176 963 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 PHKA2P46019 1235 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 NRLP54845 237 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 MLF2Q15773 248 aaPredicted RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 ZBTB41Q5SVQ8 909 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 CCDC60Q8IWA6 550 aaPredicted RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 CKAP2LQ8IYA6 745 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 CELF5Q8N6W0 485 aaKnown RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 BCL7CQ8WUZ0 217 aaPredicted RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 PHKBQ93100 1093 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 COL26A1Q96A83 441 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 CLDN23Q96B33 292 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 PLEKHA4Q9H4M7 779 aa12.63□□□□□ -0.39
CSTF3-203ENST00000438862 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
CSTF3-203ENST00000438862 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 GLUD1P00367 558 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 PROS1P07225 676 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 RETP07949 1114 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 DARSP14868 501 aaKnown RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 ATP4AP20648 1035 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 PMLP29590 882 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 SLC11A1P49279 550 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 PFKPQ01813 784 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 EFCAB12Q6NXP0 572 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 ZNF707Q96C28 371 aaPredicted RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 RPS6KC1Q96S38 1066 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 NT5C3AQ9H0P0 336 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 DNAJB4Q9UDY4 337 aa12.62□□□□□ -0.39
CSTF3-203ENST00000438862 MTF2Q9Y483 593 aaPredicted RBP12.62□□□□□ -0.39
CSTF3-203ENST00000438862 MYH15Q9Y2K3 1946 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 MTCL1Q9Y4B5 1905 aaKnown RBP12.61□□□□□ -0.39
CSTF3-203ENST00000438862 SMAPO00193 183 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 MEIS1O00470 390 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 RFPL2O75678 378 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 CCNE2O96020 404 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 SOD2P04179 222 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms