RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 KIAA0895Q8NCT3 520 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-208ENST00000438518 CCDC51Q96ER9 411 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 ZNF668Q96K58 619 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-208ENST00000438518 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 SLC39A2Q9NP94 309 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 CHST12Q9NRB3 414 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 TBC1D7Q9P0N9 293 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 NOC2LQ9Y3T9 749 aaKnown RBP20.22■□□□□ 0.83
HDAC6-208ENST00000438518 PIGRP01833 764 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 MYBP10242 640 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 CCL23P55773 120 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 PPIGQ13427 754 aaKnown RBP eCLIP20.21■□□□□ 0.839e-7■□□□□ 10.9
HDAC6-208ENST00000438518 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
HDAC6-208ENST00000438518 MBTPS1Q14703 1052 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 PLEKHG4Q58EX7 1191 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 SASS6Q6UVJ0 657 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 MYOCDQ8IZQ8 938 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 SEPT8Q92599 483 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 IFIH1Q9BYX4 1025 aaKnown RBP20.21■□□□□ 0.83
HDAC6-208ENST00000438518 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 CGNQ9P2M7 1197 aaKnown RBP20.21■□□□□ 0.83
HDAC6-208ENST00000438518 DACH1Q9UI36 760 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 PADI3Q9ULW8 664 aa20.21■□□□□ 0.83
HDAC6-208ENST00000438518 SCN5AQ14524 2016 aa20.2■□□□□ 0.83
HDAC6-208ENST00000438518 TSPAN1O60635 241 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 NBNO60934 754 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 CASP5P51878 434 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 AMHR2Q16671 573 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 CT47A1Q5JQC4 288 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-208ENST00000438518 TAS1R3Q7RTX0 852 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-208ENST00000438518 MLKLQ8NB16 471 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 SCFD1Q8WVM8 642 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 HPS3Q969F9 1004 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 SCLYQ96I15 445 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 ST3GAL5Q9UNP4 418 aa20.2■□□□□ 0.82
HDAC6-208ENST00000438518 N4BP3O15049 544 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 ITGB8P26012 769 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 NLRP12P59046 1061 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
HDAC6-208ENST00000438518 KNOP1Q1ED39 458 aaKnown RBP20.19■□□□□ 0.82
HDAC6-208ENST00000438518 ZC2HC1CQ53FD0 456 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-208ENST00000438518 NOTUMQ6P988 496 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 CNKSR3Q6P9H4 555 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 GOLGA5Q8TBA6 731 aa20.19■□□□□ 0.82
HDAC6-208ENST00000438518 LBHD1Q9BQE6 289 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-208ENST00000438518 AGO3Q9H9G7 860 aaKnown RBP20.19■□□□□ 0.82
HDAC6-208ENST00000438518 HNRNPDLO14979 420 aaKnown RBP20.18■□□□□ 0.82
HDAC6-208ENST00000438518 EFCAB14O75071 495 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 TOM1L1O75674 476 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 PRPF6O94906 941 aaKnown RBP20.18■□□□□ 0.82
HDAC6-208ENST00000438518 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-208ENST00000438518 CD52P31358 61 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 LIG4P49917 911 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 FPGSQ05932 587 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 HSP90AA2PQ14568 343 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-208ENST00000438518 GPNMBQ14956 572 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 SLFN12LQ6IEE8 588 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 FOXR2Q6PJQ5 311 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 HS2ST1Q7LGA3 356 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 SYCP3Q8IZU3 236 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 BICD1Q96G01 975 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 ADPGKQ9BRR6 497 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 TRAIPQ9BWF2 469 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 FGFBP2Q9BYJ0 223 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 GBP3Q9H0R5 595 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 IL23AQ9NPF7 189 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-208ENST00000438518 TNFSF13BQ9Y275 285 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
HDAC6-208ENST00000438518 A0A1B0GUA9 196 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 BIN1O00499 593 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 PSMA7O14818 248 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 KIAA0391O15091 583 aaKnown RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 CSDE1O75534 798 aaKnown RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ACTN1P12814 892 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ARF4P18085 180 aaPredicted RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 TMEM132AQ24JP5 1023 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ATF7IP2Q5U623 682 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ADSSL1Q8N142 457 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 DBF4BQ8NFT6 615 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 TMEM174Q8WUU8 243 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 DHTKD1Q96HY7 919 aaPredicted RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ACO2Q99798 780 aaKnown RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 TYW1Q9NV66 732 aaKnown RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 ANO10Q9NW15 660 aa20.17■□□□□ 0.82
HDAC6-208ENST00000438518 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
HDAC6-208ENST00000438518 PDXKO00764 312 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 BAIAP3O94812 1187 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 SKIP12755 728 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 CSF2RAP15509 400 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 PRCPP42785 496 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 RAB27AP51159 221 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 STX1AQ16623 288 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 DCAF4L1Q3SXM0 396 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 SLC27A1Q6PCB7 646 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 PSRC1Q6PGN9 363 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms