RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 B4GALT3O60512 393 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 LMNAP02545 664 aaKnown RBP20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 SKIP12755 728 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 RNASELQ05823 741 aaKnown RBP20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 C15orf39Q6ZRI6 1047 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 REXO1Q8N1G1 1221 aaKnown RBP20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 LENG9Q96B70 501 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 RMDN1Q96DB5 314 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 DOCK8Q8NF50 2099 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 MED19A0JLT2 244 aaPredicted RBP20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 JAK2O60674 1132 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 CFHP08603 1231 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 CNPP09543 421 aaKnown RBP20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■■□□□ 11.5
SMG1P3-201ENST00000435197 KLRC2P26717 231 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 CIITAP33076 1130 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 TARBP2Q15633 366 aaKnown RBP20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 FAM105AQ9NUU6 356 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 WNT16Q9UBV4 365 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 PIN4Q9Y237 131 aaKnown RBP20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 DMDP11532 3685 aa20.28■□□□□ 0.84
SMG1P3-201ENST00000435197 A0A087WZ62 844 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 N4BP1O75113 896 aaKnown RBP20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 OFD1O75665 1012 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 SSBP05455 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 RAB27AP51159 221 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 CDC42EP1Q00587 391 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 FDXACB1Q9BRP7 624 aaPredicted RBP20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 STK39Q9UEW8 545 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 R4GN57 208 aa20.27■□□□□ 0.84
SMG1P3-201ENST00000435197 EP300Q09472 2414 aaPredicted RBP20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 STK25O00506 426 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 CHMP2AO43633 222 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 LILRB3O75022 631 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 ZNF623O75123 536 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 XBP1P17861 261 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 ZNF280BQ86YH2 543 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 KIAA2013Q8IYS2 634 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 CMASQ8NFW8 434 aaPredicted RBP20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 RSAD2Q8WXG1 361 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 MAN1C1Q9NR34 630 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 SH3GLB2Q9NR46 395 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 SEPT9Q9UHD8 586 aaPredicted RBP20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 ZNF292O60281 2723 aa20.26■□□□□ 0.83
SMG1P3-201ENST00000435197 MSH4O15457 936 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 RFX1P22670 979 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 GJB2P29033 226 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 SFNP31947 248 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 GBP2P32456 591 aaPredicted RBP20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 JAK3P52333 1124 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 MTERF2Q49AM1 385 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 DGLUCYQ7Z3D6 616 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 CEP89Q96ST8 783 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 RIT2Q99578 217 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 MRPL17Q9NRX2 175 aaKnown RBP20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 CA14Q9ULX7 337 aa20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
SMG1P3-201ENST00000435197 IGKV6-21A0A0C4DH24 114 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 GAS7O60861 476 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 DDHD2O94830 711 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 NONOQ15233 471 aaKnown RBP eCLIP20.24■□□□□ 0.835e-7■■□□□ 14.1
SMG1P3-201ENST00000435197 URGCPQ8TCY9 931 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 RIN2Q8WYP3 895 aaPredicted RBP20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 SLC5A5Q92911 643 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 PGBD4Q96DM1 585 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 TEKT3Q9BXF9 490 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 NIFKQ9BYG3 293 aaKnown RBP20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 TBC1D17Q9HA65 648 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 EPS15L1Q9UBC2 864 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 CLUHO75153 1309 aa20.24■□□□□ 0.83
SMG1P3-201ENST00000435197 TMEM150BA6NC51 233 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 DNM2P50570 870 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 TRIM29Q14134 588 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 AGMOQ6ZNB7 445 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 RHPN2Q8IUC4 686 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 STAMQ92783 540 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 TMEM175Q9BSA9 504 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 PCDHB2Q9Y5E7 798 aa20.23■□□□□ 0.83
SMG1P3-201ENST00000435197 MIA3Q5JRA6 1907 aa20.22■□□□□ 0.83
SMG1P3-201ENST00000435197 CCDC195A0A1B0GUA6 201 aa20.22■□□□□ 0.83
SMG1P3-201ENST00000435197 C2CD2LO14523 706 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms