RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CYP1B1Q16678 543 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 TAX1BP1Q86VP1 789 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 UBLCP1Q8WVY7 318 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-207ENST00000433762 BCAS3Q9H6U6 928 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 K7ENM7 598 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 TRIM49P0CI25 452 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 TRIM49CP0CI26 452 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ARP10275 920 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 CTNNA2P26232 953 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ECE1P42892 770 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 DHX9Q08211 1270 aaKnown RBP14.75□□□□□ -0.05
COL6A3-207ENST00000433762 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 C6orf89Q6UWU4 347 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 MMS22LQ6ZRQ5 1243 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 MIER3Q7Z3K6 550 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 DDX42Q86XP3 938 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL6A3-207ENST00000433762 MCF2L2Q86YR7 1114 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 XXYLT1Q8NBI6 393 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ARHGEF26Q96DR7 871 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 PGM2Q96G03 612 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 FOXN3O00409 490 aaPredicted RBP14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ICAM1P05362 532 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 BYSLQ13895 437 aaKnown RBP14.75□□□□□ -0.05
COL6A3-207ENST00000433762 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 SPICE1Q8N0Z3 855 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 CNPY4Q8N129 248 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 MICALL1Q8N3F8 863 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ZSWIM1Q9BR11 485 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 PABPC3Q9H361 631 aaKnown RBP14.75□□□□□ -0.05
COL6A3-207ENST00000433762 ALG6Q9Y672 507 aa14.75□□□□□ -0.05
COL6A3-207ENST00000433762 EMSYQ7Z589 1322 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 ALAS1P13196 640 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 PTGER2P43116 358 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 JAMLQ86YT9 394 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 FAM71AQ8IYT1 594 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 C12orf50Q8NA57 414 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 ACER1Q8TDN7 264 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 ZFP91Q96JP5 570 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 FAM81BQ96LP2 452 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 PSMD1Q99460 953 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 TBC1D22BQ9NU19 505 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 EXOC7Q9UPT5 735 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 UBIAD1Q9Y5Z9 338 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 KIAA0391O15091 583 aaKnown RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 NCKAP1LP55160 1127 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 MAP3K10Q02779 954 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 PCNX4Q63HM2 1172 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 TTC19Q6DKK2 380 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 FAM83AQ86UY5 434 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 PRPF38AQ8NAV1 312 aaKnown RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 ACTR5Q9H9F9 607 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-207ENST00000433762 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 COG5Q9UP83 839 aa14.74□□□□□ -0.05
COL6A3-207ENST00000433762 ZBTB39O15060 712 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 DHX15O43143 795 aaKnown RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 ABCB4P21439 1286 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 GTF2H1P32780 548 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 PTGIRP43119 386 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 QARSP47897 775 aaKnown RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 RARRES1P49788 294 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 SEL1L2Q5TEA6 688 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CCDC174Q6PII3 467 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CYFIP1Q7L576 1253 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 C4orf19Q8IY42 314 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 MTMR14Q8NCE2 650 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 RDM1Q8NG50 284 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 SLCO2A1Q92959 643 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CD101Q93033 1021 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CYFIP2Q96F07 1278 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 UBE2TQ9NPD8 197 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 GINM1Q9NU53 330 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 MTRF1LQ9UGC7 380 aaKnown RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 E7EVH7 732 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CYP1A2P05177 515 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 FLT3P36888 993 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 FNTAP49354 379 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 PEX5P50542 639 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 ARHGAP44Q17R89 818 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 KRT71Q3SY84 523 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 SHC3Q92529 594 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 ALG3Q92685 438 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 STMN4Q9H169 189 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-207ENST00000433762 TAOK3Q9H2K8 898 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
COL6A3-207ENST00000433762 HSPBP1Q9NZL4 362 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms