RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 ISCUQ9H1K1 167 aa18■□□□□ 0.47
CHFR-203ENST00000432561 PLAAQ9Y263 795 aa18■□□□□ 0.47
CHFR-203ENST00000432561 NCANO14594 1321 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 GRIN2DO15399 1336 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 TULP2O00295 520 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 DDX3YO15523 660 aaKnown RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 MARCKSL1P49006 195 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 PRAMEF18Q5VWM3 479 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 INTS8Q75QN2 995 aaKnown RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 CPNE8Q86YQ8 564 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 NEK9Q8TD19 979 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 ALG3Q92685 438 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 ZBED3Q96IU2 234 aaPredicted RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 DEFB129Q9H1M3 183 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 ERVK-5Q9HDB9 667 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 TOPORSQ9NS56 1045 aaPredicted RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 KIAA1217Q5T5P2 1943 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 MYO1CO00159 1063 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 SGPL1O95470 568 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 CALCAP01258 141 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 FTLP02792 175 aaPredicted RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 KIF22Q14807 665 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
CHFR-203ENST00000432561 RASGEF1CQ8N431 466 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 TMEM117Q9H0C3 514 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 TMEM206Q9H813 350 aa17.99■□□□□ 0.47
CHFR-203ENST00000432561 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 ADSSP30520 456 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 UAP1Q16222 522 aaPredicted RBP17.98■□□□□ 0.47
CHFR-203ENST00000432561 EPC2Q52LR7 807 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 MCF2L2Q86YR7 1114 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 PPM1KQ8N3J5 372 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 MTMR14Q8NCE2 650 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 ATG4CQ96DT6 458 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
CHFR-203ENST00000432561 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 HSD17B3P37058 310 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 SEMA4DQ92854 862 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
CHFR-203ENST00000432561 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 DBR1Q9UK59 544 aaKnown RBP17.98■□□□□ 0.47
CHFR-203ENST00000432561 USP20Q9Y2K6 914 aa17.98■□□□□ 0.47
CHFR-203ENST00000432561 PPFIA4O75335 1185 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 CCT5P48643 541 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 MXI1P50539 228 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 MAP3K10Q02779 954 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 RNF207Q6ZRF8 634 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 SLC47A2Q86VL8 602 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 KRT35Q92764 455 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 BTBD6Q96KE9 485 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 CALR3Q96L12 384 aaKnown RBP17.97■□□□□ 0.47
CHFR-203ENST00000432561 CTTNBP2NLQ9P2B4 639 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 CTDP1Q9Y5B0 961 aaPredicted RBP17.97■□□□□ 0.47
CHFR-203ENST00000432561 ZNFX1Q9P2E3 1918 aaKnown RBP17.97■□□□□ 0.47
CHFR-203ENST00000432561 ANKRD62A6NC57 917 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 CYP26A1O43174 497 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 GTF2BQ00403 316 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 CIAPIN1Q6FI81 312 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 ANO5Q75V66 913 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 TEX2Q8IWB9 1127 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 MREGQ8N565 214 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 KREMEN1Q96MU8 473 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 LRRC4CQ9HCJ2 640 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
CHFR-203ENST00000432561 ZEB2O60315 1214 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 GUCY1A3Q02108 690 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 BAATQ14032 418 aaPredicted RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 NOP9Q86U38 636 aaKnown RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 BCAS4Q8TDM0 211 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 GLG1Q92896 1179 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 KIAA1683Q9H0B3 1180 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 ALG6Q9Y672 507 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 COL11A1P12107 1806 aaPredicted RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 HSPA9P38646 679 aaKnown RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 SNRNP35Q16560 246 aaKnown RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 LPAR1Q92633 364 aa17.96■□□□□ 0.47
CHFR-203ENST00000432561 ZKSCAN4Q969J2 545 aaPredicted RBP17.96■□□□□ 0.47
CHFR-203ENST00000432561 CCDC172P0C7W6 258 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
CHFR-203ENST00000432561 NPTX2P47972 431 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 NIPA1Q7RTP0 329 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 UBLCP1Q8WVY7 318 aaPredicted RBP17.95■□□□□ 0.46
CHFR-203ENST00000432561 DHX38Q92620 1227 aaKnown RBP17.95■□□□□ 0.46
CHFR-203ENST00000432561 TBC1D22BQ9NU19 505 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 CCDC188H7C350 402 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 EIF3HO15372 352 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHFR-203ENST00000432561 MMEP08473 750 aa17.95■□□□□ 0.46
CHFR-203ENST00000432561 CHRNB2P17787 502 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms