RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 HAUS6Q7Z4H7 955 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 FAM178BQ8IXR5 827 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 TOP1MTQ969P6 601 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 TIGD1Q96MW7 591 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-202ENST00000431547 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-202ENST00000431547 PVALEFA0A1B0GWK0 134 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 C9IYK1 514 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 LIG1P18858 919 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 ABCD1P33897 745 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 ASIC1P78348 528 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 CUL4BQ13620 913 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 LRIT3Q3SXY7 679 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 HERC4Q5GLZ8 1057 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-202ENST00000431547 TAS1R3Q7RTX0 852 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 SFR1Q86XK3 245 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 GRAMD1CQ8IYS0 662 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 CRIPAKQ8N1N5 446 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 CCDC51Q96ER9 411 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 CCDC34Q96HJ3 373 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 BLZF1Q9H2G9 400 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 ST6GALNAC4Q9H4F1 302 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 OLFML3Q9NRN5 406 aa20.29■□□□□ 0.84
RFTN1-202ENST00000431547 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-202ENST00000431547 CNTNAP2Q9UHC6 1331 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 A0A0U1RQF3 1178 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 A0A1B0GUA9 196 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 B4GALT5O43286 388 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 GTPBP6O43824 516 aaPredicted RBP20.28■□□□□ 0.84
RFTN1-202ENST00000431547 NR1I2O75469 434 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
RFTN1-202ENST00000431547 CASP1P29466 404 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 SARSP49591 514 aaKnown RBP20.28■□□□□ 0.84
RFTN1-202ENST00000431547 PRPF4BQ13523 1007 aaKnown RBP20.28■□□□□ 0.84
RFTN1-202ENST00000431547 TWF2Q6IBS0 349 aaKnown RBP20.28■□□□□ 0.84
RFTN1-202ENST00000431547 NOTUMQ6P988 496 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 UNC13DQ70J99 1090 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 ZNF720Q7Z2F6 126 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 HERC6Q8IVU3 1022 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 MYOCDQ8IZQ8 938 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 TET1Q8NFU7 2136 aa20.28■□□□□ 0.84
RFTN1-202ENST00000431547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.27■□□□□ 0.84
RFTN1-202ENST00000431547 NMT1P30419 496 aaKnown RBP20.27■□□□□ 0.84
RFTN1-202ENST00000431547 GTF2BQ00403 316 aa20.27■□□□□ 0.84
RFTN1-202ENST00000431547 STRN3Q13033 797 aa20.27■□□□□ 0.84
RFTN1-202ENST00000431547 COASYQ13057 564 aa20.27■□□□□ 0.84
RFTN1-202ENST00000431547 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
RFTN1-202ENST00000431547 ELOA2Q8IYF1 753 aaPredicted RBP20.27■□□□□ 0.84
RFTN1-202ENST00000431547 CPB2Q96IY4 423 aa20.27■□□□□ 0.84
RFTN1-202ENST00000431547 ELAC1Q9H777 363 aaKnown RBP20.27■□□□□ 0.84
RFTN1-202ENST00000431547 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
RFTN1-202ENST00000431547 TTLL13PA6NNM8 815 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 K7ENM7 598 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 ZNF623O75123 536 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 GJB5O95377 273 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 EDN1P05305 212 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 STAG3L1P0CL83 205 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 SKIP12755 728 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 RAB27AP51159 221 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 EHHADHQ08426 723 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 FAM109BQ6ICB4 259 aaPredicted RBP20.26■□□□□ 0.83
RFTN1-202ENST00000431547 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 NPAS4Q8IUM7 802 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 STRA6Q9BX79 667 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 MRPL4Q9BYD3 311 aaKnown RBP20.26■□□□□ 0.83
RFTN1-202ENST00000431547 LMBRD1Q9NUN5 540 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 FAM105AQ9NUU6 356 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 TMEM161AQ9NX61 479 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 TBX20Q9UMR3 447 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
RFTN1-202ENST00000431547 GRXCR1A8MXD5 290 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 GOLGA6L22H0YM25 854 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 KINO60870 393 aaKnown RBP20.25■□□□□ 0.83
RFTN1-202ENST00000431547 EOMESO95936 686 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 SMAD3P84022 425 aaKnown RBP20.25■□□□□ 0.83
RFTN1-202ENST00000431547 DPYDQ12882 1025 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 ALCAMQ13740 583 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 SLC27A1Q6PCB7 646 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 TMCO2Q7Z6W1 182 aaPredicted RBP20.25■□□□□ 0.83
RFTN1-202ENST00000431547 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
RFTN1-202ENST00000431547 TBC1D7Q9P0N9 293 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 LRFN2Q9ULH4 789 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 TNFSF13BQ9Y275 285 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 USP20Q9Y2K6 914 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 PCDHB13Q9Y5F0 798 aa20.25■□□□□ 0.83
RFTN1-202ENST00000431547 N4BP3O15049 544 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 KLRC4O43908 158 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 PPP1R37O75864 691 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 UPP2O95045 317 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 PRR29P0C7W0 189 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 POSTNQ15063 836 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 TMEM132AQ24JP5 1023 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 ZC2HC1CQ53FD0 456 aaPredicted RBP20.24■□□□□ 0.83
RFTN1-202ENST00000431547 ATF7IP2Q5U623 682 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 ZPBP2Q6X784 338 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 MRPL10Q7Z7H8 261 aaKnown RBP20.24■□□□□ 0.83
RFTN1-202ENST00000431547 ZNF598Q86UK7 904 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms