RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CCNA1P78396 465 aa18.14■□□□□ 0.49
USHBP1-203ENST00000431146 TARBP2Q15633 366 aaKnown RBP18.14■□□□□ 0.49
USHBP1-203ENST00000431146 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
USHBP1-203ENST00000431146 ZNF571Q7Z3V5 609 aaPredicted RBP18.14■□□□□ 0.49
USHBP1-203ENST00000431146 DNAAF5Q86Y56 855 aa18.14■□□□□ 0.49
USHBP1-203ENST00000431146 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
USHBP1-203ENST00000431146 DNAJC12Q9UKB3 198 aa18.14■□□□□ 0.49
USHBP1-203ENST00000431146 GFPT2O94808 682 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ARL2P36404 184 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 SNRPFP62306 86 aaKnown RBP18.13■□□□□ 0.49
USHBP1-203ENST00000431146 FKBP1BP68106 108 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 CST9Q5W186 159 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ANKRD23Q86SG2 305 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 LMO3Q8TAP4 145 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 MORC4Q8TE76 937 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ANKRD7Q92527 254 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 SECISBP2LQ93073 1101 aaKnown RBP18.13■□□□□ 0.49
USHBP1-203ENST00000431146 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 SALL4Q9UJQ4 1053 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 MOCS3O95396 460 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ATP1A1P05023 1023 aaKnown RBP18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ARHGAP44Q17R89 818 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 PHLDB3Q6NSJ2 640 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 GTF3C2Q8WUA4 911 aaPredicted RBP18.13■□□□□ 0.49
USHBP1-203ENST00000431146 TOPORSQ9NS56 1045 aaPredicted RBP18.13■□□□□ 0.49
USHBP1-203ENST00000431146 APEX2Q9UBZ4 518 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 CAPN6Q9Y6Q1 641 aa18.13■□□□□ 0.49
USHBP1-203ENST00000431146 ASB14A6NK59 587 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 RBAK-RBAKDNI3L0D1 243 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 TTLL4Q14679 1199 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 DRAP1Q14919 205 aaPredicted RBP18.12■□□□□ 0.49
USHBP1-203ENST00000431146 SLC18A3Q16572 532 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 EHBP1Q8NDI1 1231 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 DEPTORQ8TB45 409 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 TRAPPC12Q8WVT3 735 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 ZBTB10Q96DT7 871 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 PACSIN1Q9BY11 444 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 TSGA10Q9BZW7 698 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 TMEM117Q9H0C3 514 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 PUF60Q9UHX1 559 aaKnown RBP18.12■□□□□ 0.49
USHBP1-203ENST00000431146 SLC45A1Q9Y2W3 748 aa18.12■□□□□ 0.49
USHBP1-203ENST00000431146 FAM170AA1A519 330 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 F8VZ95 297 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 TADA3O75528 432 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 EDN1P05305 212 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 LIG4P49917 911 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 MAP2K1Q02750 393 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-203ENST00000431146 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-203ENST00000431146 LRRC71Q8N4P6 559 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 ELMO3Q96BJ8 720 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 FAM213AQ9BRX8 229 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 GPR88Q9GZN0 384 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 CDC23Q9UJX2 597 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 IVNS1ABPQ9Y6Y0 642 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 LRRIQ3A6PVS8 624 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-203ENST00000431146 RFC5P40937 340 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 NAMPTP43490 491 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 MXI1P50539 228 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 STRN3Q13033 797 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 CAPSQ13938 189 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 ARHGEF19Q8IW93 802 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 PARD3BQ8TEW8 1205 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 SCFD2Q8WU76 684 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 ZBTB45Q96K62 511 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-203ENST00000431146 MYO6Q9UM54 1294 aa18.11■□□□□ 0.49
USHBP1-203ENST00000431146 EVPLQ92817 2033 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 ZBTB42B2RXF5 422 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 MAPK13O15264 365 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 BUB1O43683 1085 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 EVI5O60447 810 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 MAFO75444 373 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 LGR5O75473 907 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 DLATP10515 647 aaKnown RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 STAT1P42224 750 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 GCLCP48506 637 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 PLCB4Q15147 1175 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 EPC2Q52LR7 807 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 TAPT1Q6NXT6 567 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 GPR142Q7Z601 462 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 PRPF31Q8WWY3 499 aaKnown RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 ZNF668Q96K58 619 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 STK33Q9BYT3 514 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 EPC1Q9H2F5 836 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 MORF4L1Q9UBU8 362 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 SIP14410 1827 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 K7ERI5 159 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 SRGAP2O75044 1071 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 SOX5P35711 763 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 HUNKP57058 714 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 AMPD2Q01433 879 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 GPD1LQ8N335 351 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 HAPLN2Q9GZV7 340 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 UBE2TQ9NPD8 197 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-203ENST00000431146 TRPC6Q9Y210 931 aa18.1■□□□□ 0.49
USHBP1-203ENST00000431146 DOCK3Q8IZD9 2030 aa18.09■□□□□ 0.49
USHBP1-203ENST00000431146 H0YCG3 227 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms