RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 SEPT8Q92599 483 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 CCDC51Q96ER9 411 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 SCLYQ96I15 445 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 ACCSQ96QU6 501 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 AGPAT5Q9NUQ2 364 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 TBX20Q9UMR3 447 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 PIN4Q9Y237 131 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 NOC2LQ9Y3T9 749 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 MICAL3Q7RTP6 2002 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 BIN1O00499 593 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 N4BP3O15049 544 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 TSPAN1O60635 241 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 NBNO60934 754 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 PIGRP01833 764 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 CXCL10P02778 98 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 CD52P31358 61 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 LIG4P49917 911 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 CASP5P51878 434 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 FPGSQ05932 587 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 STK4Q13043 487 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 MBTPS1Q14703 1052 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 STX1AQ16623 288 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 ZPBP2Q6X784 338 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 EPM2AIP1Q7L775 607 aaPredicted RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 SYCP3Q8IZU3 236 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 GUF1Q8N442 669 aaKnown RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 STRA6Q9BX79 667 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 FZD8Q9H461 694 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 MINDY3Q9H8M7 445 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 CDHR5Q9HBB8 845 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 ZMYND8Q9ULU4 1186 aaPredicted RBP12.08□□□□□ -0.48
CHD4-202ENST00000430771 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
CHD4-202ENST00000430771 PSMA7O14818 248 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 KCNA4P22459 653 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 RAB27AP51159 221 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 AMHR2Q16671 573 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 DCAF4L1Q3SXM0 396 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ZC2HC1CQ53FD0 456 aaPredicted RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 PLEKHG4Q58EX7 1191 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ATF7IP2Q5U623 682 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 PSRC1Q6PGN9 363 aaPredicted RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 TAS1R3Q7RTX0 852 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 GOLGA5Q8TBA6 731 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 AGO3Q9H9G7 860 aaKnown RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 CHST12Q9NRB3 414 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ANO10Q9NW15 660 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 CGNQ9P2M7 1197 aaKnown RBP12.07□□□□□ -0.48
CHD4-202ENST00000430771 PADI3Q9ULW8 664 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ST3GAL5Q9UNP4 418 aa12.07□□□□□ -0.48
CHD4-202ENST00000430771 ZMYM2Q9UBW7 1377 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 EFCAB14O75071 495 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 CSDE1O75534 798 aaKnown RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 TOM1L1O75674 476 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 CCDC192P0DO97 292 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 ACTN1P12814 892 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 CSF2RAP15509 400 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 SYN1P17600 705 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 ARF4P18085 180 aaPredicted RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 FGFR4P22455 802 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 ITGB8P26012 769 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHD4-202ENST00000430771 NLRP12P59046 1061 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 HSP90AA2PQ14568 343 aaPredicted RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 KNOP1Q1ED39 458 aaKnown RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 DEFB128Q7Z7B8 93 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 NELFCDQ8IXH7 590 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 MLKLQ8NB16 471 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 GLIS3Q8NEA6 775 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 BADQ92934 168 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 TSG101Q99816 390 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 TRIM6Q9C030 488 aaPredicted RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 IL23AQ9NPF7 189 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 TYW1Q9NV66 732 aaKnown RBP12.06□□□□□ -0.48
CHD4-202ENST00000430771 ANKFY1Q9P2R3 1169 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms