RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 ZNF317Q96PQ6 595 aaPredicted RBP16.21■□□□□ 0.19
LINC00839-202ENST00000429940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00839-202ENST00000429940 ALG6Q9Y672 507 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 LRRN2O75325 713 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 KIF22Q14807 665 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
LINC00839-202ENST00000429940 C1orf186Q6ZWK4 172 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 KCTD17Q8N5Z5 321 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 ANKS4BQ8N8V4 417 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
LINC00839-202ENST00000429940 AGPAT3Q9NRZ7 376 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 GRHL1Q9NZI5 618 aa16.21■□□□□ 0.19
LINC00839-202ENST00000429940 RPTORQ8N122 1335 aa16.21■□□□□ 0.18
LINC00839-202ENST00000429940 CCT8L1PA6NM43 557 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 DNAJC8O75937 253 aaPredicted RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 CHRNA3P32297 505 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 PTGIRP43119 386 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 PPP2R5AQ15172 486 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 APOBEC3HQ6NTF7 200 aaKnown RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 RPAINQ86UA6 219 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 UBL4BQ8N7F7 174 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 DYDC2Q96IM9 177 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 AGPAT1Q99943 283 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 HSD17B14Q9BPX1 270 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 TACO1Q9BSH4 297 aaKnown RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 CTTNBP2NLQ9P2B4 639 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 BCS1LQ9Y276 419 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 MIF4GDA9UHW6 222 aaKnown RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 FOXN3O00409 490 aaPredicted RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 CHMP2AO43633 222 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 IFI35P80217 286 aaPredicted RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 PHLDB3Q6NSJ2 640 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 STXBP4Q6ZWJ1 553 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 FAM228AQ86W67 206 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 FAM178BQ8IXR5 827 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 SCLT1Q96NL6 688 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 ADAM7Q9H2U9 754 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 TUFT1Q9NNX1 390 aa16.2■□□□□ 0.18
LINC00839-202ENST00000429940 TPX2Q9ULW0 747 aaKnown RBP16.2■□□□□ 0.18
LINC00839-202ENST00000429940 UBE4BO95155 1302 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 TMEM110-MUSTN1A8MSY1 372 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 F5H6K3 240 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ZBTB39O15060 712 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ASAP2O43150 1006 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SLITRK3O94933 977 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 HSPA6P17066 643 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 GBP1P32455 592 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 RPL21P46778 160 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 MMP14P50281 582 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ICA1Q05084 483 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ADCY2Q08462 1091 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 NEDD9Q14511 834 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 C6orf118Q5T5N4 469 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 C11orf63Q6NUN7 778 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ZNF720Q7Z2F6 126 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 PRELID2Q8N945 189 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 GIMAP7Q8NHV1 300 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SLC20A1Q8WUM9 679 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 KRT35Q92764 455 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SEMA4AQ9H3S1 761 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 INTS9Q9NV88 658 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 DMAC2Q9NW81 257 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 MTRF1LQ9UGC7 380 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 ECE2O60344 883 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 AGTP01019 485 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 CYP3A4P08684 503 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 MARCKSL1P49006 195 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 TCP10Q12799 353 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 WLSQ5T9L3 541 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 HHIPL2Q6UWX4 724 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SIAH1Q8IUQ4 282 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 UHMK1Q8TAS1 419 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 FIZ1Q96SL8 496 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 SEL1LQ9UBV2 794 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 PCYOX1Q9UHG3 505 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
LINC00839-202ENST00000429940 MCM8Q9UJA3 840 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
LINC00839-202ENST00000429940 IGLV3-22A0A075B6J6 115 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 PODXLO00592 558 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 OPLAHO14841 1288 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 FTLP02792 175 aaPredicted RBP16.18■□□□□ 0.18
LINC00839-202ENST00000429940 RFX1P22670 979 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 CTNNA2P26232 953 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 CACNB3P54284 484 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 BFSP1Q12934 665 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 ITIH4Q14624 930 aa16.18■□□□□ 0.18
LINC00839-202ENST00000429940 UBAP2Q5T6F2 1119 aaKnown RBP16.18■□□□□ 0.18
LINC00839-202ENST00000429940 LRCH2Q5VUJ6 765 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms