RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LIN9Q5TKA1 542 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 TTC27Q6P3X3 843 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 XKRXQ6PP77 449 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 RPAP3Q9H6T3 665 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 SPC25Q9HBM1 224 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PTPRMP28827 1452 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ZBED1O96006 694 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 MAPRE2Q15555 327 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 MIS18BP1Q6P0N0 1132 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ZNF713Q8N859 430 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 FANCBQ8NB91 859 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 DLG3Q92796 817 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 MTERF3Q96E29 417 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 EPC1Q9H2F5 836 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 WBP11Q9Y2W2 641 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 BTBD19C9JJ37 291 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 C6orf229H3BNL8 230 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 FCGR1AP12314 374 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 XRCC5P13010 732 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 PPARAQ07869 468 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ZNF658Q5TYW1 1059 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 CABP7Q86V35 215 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CNOT6LQ96LI5 555 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 HINFPQ9BQA5 517 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 FUCA2Q9BTY2 467 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CCNG1P51959 295 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 GYS2P54840 703 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CYP4A11Q02928 519 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 FIGNQ5HY92 759 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CYP4A22Q5TCH4 519 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 SPATA4Q8NEY3 305 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 COPG2Q9UBF2 871 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 SRPRBQ9Y5M8 271 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 KNDC1Q76NI1 1749 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PURAQ00577 322 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 TBL3Q12788 808 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 MGARPQ8TDB4 240 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 UNKQ9C0B0 810 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 LRMDAQ9H2I8 198 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 EPB41L5Q9HCM4 733 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 NCAPD2Q15021 1401 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CCNCP24863 283 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 EPS8Q12929 822 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 NAA30Q147X3 362 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 APOA5Q6Q788 366 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CCDC105Q8IYK2 499 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 TOR1AIP2Q8NFQ8 470 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 LSM14BQ9BX40 385 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 NHEJ1Q9H9Q4 299 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 NLRC4Q9NPP4 1024 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 COBLO75128 1261 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CIAO1O76071 339 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PCNAP12004 261 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 GUCY1A3Q02108 690 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 RASSF7Q02833 373 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 KHDRBS1Q07666 443 aaKnown RBP eCLIP8□□□□□ -1.13
SYNPO2-202ENST00000429713 RASA3Q14644 834 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PROSER3Q2NL68 480 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 EMC10Q5UCC4 262 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PACS1Q6VY07 963 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 DYMQ7RTS9 669 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 RASSF3Q86WH2 238 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ZBTB38Q8NAP3 1195 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 HPS1Q92902 700 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 TGS1Q96RS0 853 aaKnown RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ANKHQ9HCJ1 492 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 SPATA7Q9P0W8 599 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ASIC3Q9UHC3 531 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 DCDC2Q9UHG0 476 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 ATP8B3O60423 1300 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 KDM3AQ9Y4C1 1321 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 SCN9AQ15858 1988 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 SH3BP5O60239 455 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 TMEM126BQ8IUX1 230 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
SYNPO2-202ENST00000429713 STX19Q8N4C7 294 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 MAST3O60307 1309 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 FAM47DPA6NHR8 397 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 POTECB2RU33 542 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 TECP42680 631 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 TCP11X2Q5H9J9 407 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 ARMCX5Q6P1M9 558 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 GRAMD1CQ8IYS0 662 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 CABLES1Q8TDN4 633 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 EEF2KMTQ96G04 330 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 OSBPL8Q9BZF1 889 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 AP1G2O75843 785 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 RECQLP46063 649 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 HSPA2P54652 639 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 RAB14P61106 215 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 SCRN3Q0VDG4 424 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 SF3A3Q12874 501 aaKnown RBP eCLIP7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 LUZP2Q86TE4 346 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 CCDC127Q96BQ5 260 aa7.99□□□□□ -1.13
SYNPO2-202ENST00000429713 SERPINB12Q96P63 405 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms