RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FAM169AQ9Y6X4 670 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 COL2A1P02458 1487 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 GREB1LQ9C091 1923 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 NCANO14594 1321 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 NPHP3-ACAD11A0A0J9YXS1 232 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 GOLGA6L10A0A0M3HER8 536 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 MANSC4A6NHS7 340 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 KRIT1O00522 736 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 FAM13AO94988 1023 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 GCNT3O95395 438 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 TMEM253P0C7T8 217 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ZBTB48P10074 688 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SLC9A1P19634 815 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 INPP5BP32019 993 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SOX5P35711 763 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ZNF76P36508 570 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 MDH1P40925 334 aaKnown RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 CRKP46108 304 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ARID5AQ03989 594 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ALCAMQ13740 583 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 HLTFQ14527 1009 aaKnown RBP eCLIP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 TCEAL1Q15170 157 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 MTFR1Q15390 333 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 HS2ST1Q7LGA3 356 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 MORC4Q8TE76 937 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 PIK3R5Q8WYR1 880 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SEC14L1Q92503 715 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SLC35C1Q96A29 364 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 RUNDC3BQ96NL0 473 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 EIF2AK1Q9BQI3 630 aaKnown RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 FGFBP2Q9BYJ0 223 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 GCNT4Q9P109 453 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
GABPB1-205ENST00000429662 UTP11Q9Y3A2 253 aaKnown RBP9.43□□□□□ -0.9
GABPB1-205ENST00000429662 PFASO15067 1338 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 TMCO5BA8MYB1 307 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 F5H6K3 240 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 MSH4O15457 936 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 P4HA2O15460 535 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 AKAP3O75969 853 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 FAM153BP0C7A2 387 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CTGFP29279 349 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 LSP1P33241 339 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 STAT3P40763 770 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 HADHBP55084 474 aaKnown RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SNRPFP62306 86 aaKnown RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SP3Q02447 781 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 ICA1Q05084 483 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 KLRC3Q07444 240 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CETN1Q12798 172 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PPP2R5CQ13362 524 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PLCB4Q15147 1175 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PTGISQ16647 500 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 FAM153CQ494X1 144 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CEP85LQ5SZL2 805 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 TAX1BP1Q86VP1 789 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 KLHL7Q8IXQ5 586 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 METTL13Q8N6R0 699 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SLC30A5Q8TAD4 765 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 NEK9Q8TD19 979 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CTNNBL1Q8WYA6 563 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 RFFLQ8WZ73 363 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 LENG9Q96B70 501 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 BORCS6Q96GS4 357 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 HES6Q96HZ4 224 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 NACC1Q96RE7 527 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PACSIN1Q9BY11 444 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 FAM129AQ9BZQ8 928 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CARD9Q9H257 536 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 CNOT10Q9H9A5 744 aaKnown RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PARVGQ9HBI0 331 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SIX2Q9NPC8 291 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.42□□□□□ -0.97e-7■■□□□ 14.1
GABPB1-205ENST00000429662 FAM153AQ9UHL3 310 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 VAV3Q9UKW4 847 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 PLAAQ9Y263 795 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 FRMD4BQ9Y2L6 1034 aa9.42□□□□□ -0.9
GABPB1-205ENST00000429662 NOC2LQ9Y3T9 749 aaKnown RBP9.42□□□□□ -0.9
GABPB1-205ENST00000429662 MGAMO43451 1857 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms