RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 UNC80Q8N2C7 3258 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 ARNTLO00327 626 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 FPR2P25090 351 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 MRPS5P82675 430 aaKnown RBP7.95□□□□□ -1.14
PTPRK-211ENST00000429595 TMEM31Q5JXX7 168 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 STRIP1Q5VSL9 837 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 GTF2IRD2BQ6EKJ0 949 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 C17orf99Q6UX52 265 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 GTF2IRD2Q86UP8 949 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 NLRP10Q86W26 655 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 TRIM59Q8IWR1 403 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 MRGPRX3Q96LB0 322 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 LRFN3Q9BTN0 628 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 MXD3Q9BW11 206 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-211ENST00000429595 CEMIPQ8WUJ3 1361 aa7.95□□□□□ -1.14
PTPRK-211ENST00000429595 C22orf46C9J442 243 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 BTBD19C9JJ37 291 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 MATN3O15232 486 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 MRE11P49959 708 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
PTPRK-211ENST00000429595 SNAPC2Q13487 334 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 SF3B3Q15393 1217 aaKnown RBP7.94□□□□□ -1.14
PTPRK-211ENST00000429595 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-211ENST00000429595 FAM26FQ5R3K3 315 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 DACT2Q5SW24 774 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 NT5DC4Q86YG4 428 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 SEC14L1Q92503 715 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 APBA2Q99767 749 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTPRK-211ENST00000429595 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 PANK3Q9H999 370 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 THEGQ9P2T0 379 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 INVSQ9Y283 1065 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 ADGRA2Q96PE1 1338 aa7.94□□□□□ -1.14
PTPRK-211ENST00000429595 ANKRD36CQ5JPF3 1778 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 CLRN2A0PK11 232 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 ZNF20P17024 532 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 CTGFP29279 349 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 SLC6A11P48066 632 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 FLT3LGP49771 235 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 MCTP2Q6DN12 878 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 TTLL5Q6EMB2 1281 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 POMZP3Q6PJE2 187 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 MCM10Q7L590 875 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 CCDC103Q8IW40 242 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 Q8N1Y9 231 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 PNISRQ8TF01 805 aaKnown RBP7.93□□□□□ -1.14
PTPRK-211ENST00000429595 SAMD11Q96NU1 681 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 C1QTNF3Q9BXJ4 246 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 NKX2-4Q9H2Z4 354 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 PCDH18Q9HCL0 1135 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 CYP26B1Q9NR63 512 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 TMEFF2Q9UIK5 374 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-211ENST00000429595 KNSTRNQ9Y448 316 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 BRCA2P51587 3418 aa7.93□□□□□ -1.14
PTPRK-211ENST00000429595 SIPA1L3O60292 1781 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 SCN9AQ15858 1988 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 TBX1O43435 398 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 STAT5AP42229 794 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 RBM5P52756 815 aaKnown RBP eCLIP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 AIMP1Q12904 312 aaKnown RBP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 TNFAIP1Q13829 316 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 VGLL4Q14135 290 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 RASA3Q14644 834 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 CR1LQ2VPA4 569 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 CPZQ66K79 652 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 FAM126BQ8IXS8 530 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 CRACR2BQ8N4Y2 399 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 TTC9BQ8N6N2 239 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 TXNDC5Q8NBS9 432 aaKnown RBP7.92□□□□□ -1.14
PTPRK-211ENST00000429595 LOXL4Q96JB6 756 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 FBXL7Q9UJT9 491 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 GABRQQ9UN88 632 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 ZNF804BA4D1E1 1349 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 XDHP47989 1333 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 HTTP42858 3142 aa7.92□□□□□ -1.14
PTPRK-211ENST00000429595 TTC28Q96AY4 2481 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 MROH6A6NGR9 719 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 PDHXO00330 501 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 DDX3XO00571 662 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 TNPO2O14787 897 aaKnown RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 ZNF143P52747 638 aaPredicted RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 SMAD3P84022 425 aaKnown RBP7.91□□□□□ -1.14
PTPRK-211ENST00000429595 ADAM9Q13443 819 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 MILR1Q7Z6M3 343 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 ERO1BQ86YB8 467 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 RIOX2Q8IUF8 465 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 LGI4Q8N135 537 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 BTN2A2Q8WVV5 523 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 ZNF428Q96B54 188 aa7.91□□□□□ -1.14
PTPRK-211ENST00000429595 COA7Q96BR5 231 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms