RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 KBTBD2Q8IY47 623 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CKAP2Q8WWK9 683 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 COX4I2Q96KJ9 171 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CCDC8Q9H0W5 538 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 MYLK2Q9H1R3 596 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 PABPC3Q9H361 631 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 SEL1LQ9UBV2 794 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 HAO1Q9UJM8 370 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 PLAGL2Q9UPG8 496 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 SNX9Q9Y5X1 595 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 RASA4BC9J798 803 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 FAM47E-STBD1D6RA91 191 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 CCDC188H7C350 402 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 CPLX1O14810 134 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 MAPK13O15264 365 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 RASA4O43374 803 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 DCTN3O75935 186 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 PLCG2P16885 1265 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 VPS41P49754 854 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 HSPA2P54652 639 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 RPL26P61254 145 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 MTFR1Q15390 333 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 RABL6Q3YEC7 729 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 CERKLQ49MI3 558 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 FAM209AQ5JX71 171 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SNRNP48Q6IEG0 339 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 KRT26Q7Z3Y9 468 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 C14orf80Q86SX3 495 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 KIAA1683Q9H0B3 1180 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 GJB4Q9NTQ9 266 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 AGPAT5Q9NUQ2 364 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 DNAJB4Q9UDY4 337 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ANGPTL2Q9UKU9 493 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 NOX1Q9Y5S8 564 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 KCPQ6ZWJ8 1503 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 E7EWF7 191 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 T-ENOLP0DO92 83 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 NEK3P51956 506 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 LPIN1Q14693 890 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 METTL21CQ5VZV1 264 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 KRT40Q6A162 431 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SATL1Q86VE3 508 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 KLHL7Q8IXQ5 586 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZNF713Q8N859 430 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 CEP70Q8NHQ1 597 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 LPIN2Q92539 896 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 USP6NLQ92738 828 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 PRICKLE1Q96MT3 831 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 LRRC37BQ96QE4 947 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 UIMC1Q96RL1 719 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ECSITQ9BQ95 431 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 DSCC1Q9BVC3 393 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SLC7A5P2Q9GIP4 190 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SLITRK6Q9H5Y7 841 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 PLGRKTQ9HBL7 147 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 LRRC4CQ9HCJ2 640 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 SAR1AQ9NR31 198 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 PPP1R9AQ9ULJ8 1098 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 STRCQ7RTU9 1775 aa9.48□□□□□ -0.89
CDC42BPA-206ENST00000429440 ARHGAP10A1A4S6 786 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 A8MXQ7 604 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 OPHN1O60890 802 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 RNASEH1O60930 286 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 STAM2O75886 525 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 GRIA2P42262 883 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 MAGEA1P43355 309 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 KIF11P52732 1056 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 IFI35P80217 286 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 E2F2Q14209 437 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 ACSBG2Q5FVE4 666 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 MFSD5Q6N075 450 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 BORAQ6PGQ7 559 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 NLRP9Q7RTR0 991 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 IRF2BP1Q8IU81 584 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DDHD1Q8NEL9 900 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 ACTRT1Q8TDG2 376 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 GIMAP1Q8WWP7 306 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 STMN2Q93045 179 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 MTMR8Q96EF0 704 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 PAGE5Q96GU1 130 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 EPB41L4BQ9H329 900 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 BOLA2Q9H3K6 86 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms