RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 ERLIN2O94905 339 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 PLCG1P19174 1290 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 NAMPTP43490 491 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 TFF2Q03403 129 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 TCEAL5Q5H9L2 206 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 NOTUMQ6P988 496 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 TAS1R3Q7RTX0 852 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 P2RX5Q93086 422 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 IPPQ9Y573 584 aa11.88□□□□□ -0.51
ATG4B-210ENST00000428861 SRPRBQ9Y5M8 271 aaKnown RBP11.88□□□□□ -0.51
ATG4B-210ENST00000428861 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 HOXA2O43364 376 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NPTXRO95502 500 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 LIG1P18858 919 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NCLP19338 710 aaKnown RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 AXLP30530 894 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 UBA7P41226 1012 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NPTX2P47972 431 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 RAB27AP51159 221 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 PEX3P56589 373 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 MCM6Q14566 821 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 PCBP1Q15365 356 aaKnown RBP eCLIP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 SKIV2LQ15477 1246 aaKnown RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 FAM187BQ17R55 369 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 SPOUT1Q5T280 376 aaKnown RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NT5DC1Q5TFE4 455 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 TMEM173Q86WV6 379 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 ZBTB8OSQ8IWT0 167 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 ABI1Q8IZP0 508 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 LINC00301Q8NCQ3 95 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 DEPTORQ8TB45 409 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 POF1BQ8WVV4 589 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 KIFAP3Q92845 792 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 CCSER1Q9C0I3 900 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NT5C3AQ9H0P0 336 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 CXCL16Q9H2A7 254 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 PDZD7Q9H5P4 517 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 NRDE2Q9H7Z3 1164 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 PRMT7Q9NVM4 692 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-210ENST00000428861 MIOSQ9NXC5 875 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 ZDHHC9Q9Y397 364 aa11.87□□□□□ -0.51
ATG4B-210ENST00000428861 CNTNAP2Q9UHC6 1331 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 BRWD1Q9NSI6 2320 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 A0A087X0B3 334 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 ACKR2O00590 384 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 FGF18O76093 207 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 DDHD2O94830 711 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 F13A1P00488 732 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 PRKCBP05771 671 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
ATG4B-210ENST00000428861 SKIP12755 728 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 AKAP5P24588 427 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 ERVFC1P60507 584 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
ATG4B-210ENST00000428861 PTPROQ16827 1216 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 NAALADL2Q58DX5 795 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 NOMO2Q5JPE7 1267 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 KCNT2Q6UVM3 1135 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 ADGRD2Q7Z7M1 963 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 SLC39A11Q8N1S5 342 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 GSTCDQ8NEC7 633 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-210ENST00000428861 RAD54LQ92698 747 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 CDK5RAP3Q96JB5 506 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 GAD1Q99259 594 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 APOL6Q9BWW8 343 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 DNAJB4Q9UDY4 337 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 PCDHB12Q9Y5F1 795 aa11.86□□□□□ -0.51
ATG4B-210ENST00000428861 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms