RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 KLRC1P26715 233 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MARK3P27448 753 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 LIG4P49917 911 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 PTENP60484 403 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 ADAM17P78536 824 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
NR1I3-209ENST00000428574 BFSP1Q12934 665 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MFSD10Q14728 455 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MAPK6Q16659 721 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 EFCAB12Q6NXP0 572 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 SESTD1Q86VW0 696 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 NME8Q8N427 588 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 ZNF397Q8NF99 534 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-209ENST00000428574 KAT2BQ92831 832 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 SLC35C1Q96A29 364 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 SH2D3AQ9BRG2 576 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-209ENST00000428574 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
NR1I3-209ENST00000428574 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 ARHGAP39Q9C0H5 1083 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 FZD8Q9H461 694 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 PRMT7Q9NVM4 692 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-209ENST00000428574 HSPBP1Q9NZL4 362 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 CAPN11Q9UMQ6 739 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 ZSWIM8A7E2V4 1837 aa9.91□□□□□ -0.82
NR1I3-209ENST00000428574 ACKR2O00590 384 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CCP110O43303 1012 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 EXTL3O43909 919 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 GYPCP04921 128 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 PTGS1P23219 599 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 HNRNPH3P31942 346 aaKnown RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 PSEN2P49810 448 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 ZBED6P86452 979 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CDK17Q00537 523 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 PTPN11Q06124 597 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CETN1Q12798 172 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 TC2NQ8N9U0 490 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 PCSK9Q8NBP7 692 aaKnown RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 TRPV1Q8NER1 839 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 DNAJC7Q99615 494 aa9.9□□□□□ -0.82
NR1I3-209ENST00000428574 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
NR1I3-209ENST00000428574 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 A0A0B4J269 797 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CLIC2O15247 247 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 ADAMTS4O75173 837 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 PRKCBP05771 671 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 PRKAR2AP13861 404 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 PROZP22891 400 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 ADSSP30520 456 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CASP4P49662 377 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CYP2J2P51589 502 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 AP3M2P53677 418 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CLDN10P78369 228 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CCZ1BP86790 482 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CCZ1P86791 482 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 MCL1Q07820 350 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SYCP1Q15431 976 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SURF1Q15526 300 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SNRNP35Q16560 246 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 PRAMEF19Q5SWL8 479 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 NFRKBQ6P4R8 1299 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 GBP6Q6ZN66 633 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
NR1I3-209ENST00000428574 GPD1LQ8N335 351 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
NR1I3-209ENST00000428574 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms