RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 TMTC2Q8N394 836 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 ZBTB44Q8NCP5 570 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 TMEM87BQ96K49 555 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 RPS6KC1Q96S38 1066 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 FDXACB1Q9BRP7 624 aaPredicted RBP9.09□□□□□ -0.95
CSTF1-203ENST00000428552 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 HERC2P3Q9BVR0 1158 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 RXFP1Q9HBX9 757 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 PARD6AQ9NPB6 346 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
CSTF1-203ENST00000428552 TBC1D22BQ9NU19 505 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 BARHL2Q9NY43 387 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
CSTF1-203ENST00000428552 MIA3Q5JRA6 1907 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 MYH15Q9Y2K3 1946 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 DCDC2BA2VCK2 349 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SHISA7A6NL88 538 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 C2CD2LO14523 706 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SPTLC1O15269 473 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 ADRB1P08588 477 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SPATA31D3P0C874 917 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 MCM5P33992 734 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 ZNF76P36508 570 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 GPC5P78333 572 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 NONOQ15233 471 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 ST3GAL2Q16842 350 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 UBXN11Q5T124 520 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 TWF2Q6IBS0 349 aaKnown RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 LILRA6Q6PI73 481 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 APOA5Q6Q788 366 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 PARM1Q6UWI2 310 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SPATA31D4Q6ZUB0 917 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SMG7Q92540 1137 aaKnown RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 STAMQ92783 540 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 FGF14Q92915 247 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 NT5C3AQ9H0P0 336 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 EPC1Q9H2F5 836 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 MRPL17Q9NRX2 175 aaKnown RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 FBXO4Q9UKT5 387 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 BRPF3Q9ULD4 1205 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 PIN4Q9Y237 131 aaKnown RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
CSTF1-203ENST00000428552 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
CSTF1-203ENST00000428552 KANSL1LA0AUZ9 987 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 GLUD1P00367 558 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 RFX1P22670 979 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 HOXA11P31270 313 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 CIITAP33076 1130 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 RAB27AP51159 221 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 AK2P54819 239 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 SETQ01105 290 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 DSG1Q02413 1049 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 RNASELQ05823 741 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 FZD5Q13467 585 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 SNW1Q13573 536 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 B3GNT9Q6UX72 402 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 GET4Q7L5D6 327 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 KSR1Q8IVT5 923 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 COLGALT2Q8IYK4 626 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 GJA10Q969M2 543 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 B3GALT6Q96L58 329 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 SCLT1Q96NL6 688 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 SH2D3AQ9BRG2 576 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 NIFKQ9BYG3 293 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 GCOM2Q9BZD3 368 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 LSG1Q9H089 658 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 DISC1Q9NRI5 854 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 CHST7Q9NS84 486 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 NCDNQ9UBB6 729 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 STK39Q9UEW8 545 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 SMG5Q9UPR3 1016 aaKnown RBP9.07□□□□□ -0.96
CSTF1-203ENST00000428552 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 PCDHB2Q9Y5E7 798 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 PCDHGA2Q9Y5H1 932 aa9.07□□□□□ -0.96
CSTF1-203ENST00000428552 MTCL1Q9Y4B5 1905 aaKnown RBP9.06□□□□□ -0.96
CSTF1-203ENST00000428552 DOCK6Q96HP0 2047 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 hCG_1984214I3L0E3 225 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 SLC27A2O14975 620 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 MSH4O15457 936 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 TGM5O43548 720 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 POMCP01189 267 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 ALDH2P05091 517 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 URODP06132 367 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 ADH1AP07327 375 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 SKIP12755 728 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 TDGF1P13385 188 aa9.06□□□□□ -0.96
CSTF1-203ENST00000428552 SFPQP23246 707 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSTF1-203ENST00000428552 CDC27P30260 824 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms