RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 TIFAQ96CG3 184 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 CCDC34Q96HJ3 373 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 YME1L1Q96TA2 773 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 REEP2Q9BRK0 252 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 SLC28A3Q9HAS3 691 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 TSHZ2Q9NRE2 1034 aa25.86■■□□□ 1.73
GLI3-202ENST00000428534 ACKR2O00590 384 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 MGEA5O60502 916 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 ZNF131P52739 623 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 HTRA4P83105 476 aaPredicted RBP25.85■■□□□ 1.73
GLI3-202ENST00000428534 E2F4Q16254 413 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 APBB1IPQ7Z5R6 666 aaPredicted RBP25.85■■□□□ 1.73
GLI3-202ENST00000428534 MAFAQ8NHW3 353 aaPredicted RBP25.85■■□□□ 1.73
GLI3-202ENST00000428534 DDX12PQ92771 950 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 PGBD4Q96DM1 585 aa25.85■■□□□ 1.73
GLI3-202ENST00000428534 CHD9Q3L8U1 2897 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 A0A087X0B3 334 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 TSPAN1O60635 241 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 PRKCBP05771 671 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 GAP43P17677 238 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 TMEM132AQ24JP5 1023 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 HACE1Q8IYU2 909 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 MYCT1Q8N699 235 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 MRPS27Q92552 414 aaKnown RBP25.84■■□□□ 1.73
GLI3-202ENST00000428534 KCNN1Q92952 543 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 KBTBD4Q9NVX7 518 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 ARHGAP28Q9P2N2 729 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 SEL1LQ9UBV2 794 aa25.84■■□□□ 1.73
GLI3-202ENST00000428534 FAM237AA0A1B0GTK4 181 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 SFI1A8K8P3 1242 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 ZNF623O75123 536 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 RABGGTBP53611 331 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 STRN3Q13033 797 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 PRPF4BQ13523 1007 aaKnown RBP25.83■■□□□ 1.73
GLI3-202ENST00000428534 FAM117BQ6P1L5 589 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 ECHDC2Q86YB7 292 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 ZHX3Q9H4I2 956 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 POLD4Q9HCU8 107 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 FAM105AQ9NUU6 356 aa25.83■■□□□ 1.73
GLI3-202ENST00000428534 MYO9BQ13459 2157 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 NPHP3-ACAD11A0A0J9YXS1 232 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 N4BP3O15049 544 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 TRAK2O60296 914 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 MAPTP10636 758 aaKnown RBP25.82■■□□□ 1.72
GLI3-202ENST00000428534 HOXA11P31270 313 aaPredicted RBP25.82■■□□□ 1.72
GLI3-202ENST00000428534 SYKP43405 635 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 AMHR2Q16671 573 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 DYMQ7RTS9 669 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 CRIPAKQ8N1N5 446 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 CHAMP1Q96JM3 812 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 ADPGKQ9BRR6 497 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 CCDC113Q9H0I3 377 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 GDPD2Q9HCC8 539 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 UBN1Q9NPG3 1134 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 HPSEQ9Y251 543 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 CNTNAP2Q9UHC6 1331 aa25.82■■□□□ 1.72
GLI3-202ENST00000428534 A0A1B0GUA9 196 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 A0A1B0GVL5 298 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 MYMKA6NI61 221 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 DGKIO75912 1065 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 SLFN14P0C7P3 912 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 PFKFB1P16118 471 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 ARF4P18085 180 aaPredicted RBP25.81■■□□□ 1.72
GLI3-202ENST00000428534 PBX2P40425 430 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 NCKAP1LP55160 1127 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 CNNM4Q6P4Q7 775 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 SLC27A1Q6PCB7 646 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 FAM178BQ8IXR5 827 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 CCDC65Q8IXS2 484 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 FSIP1Q8NA03 581 aa25.81■■□□□ 1.72
GLI3-202ENST00000428534 TRIM6Q9C030 488 aaPredicted RBP25.81■■□□□ 1.72
GLI3-202ENST00000428534 SLC16A4O15374 487 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 MYL1P05976 194 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 FOSL2P15408 326 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 CACNB1Q02641 598 aaPredicted RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 PPP2R2DQ66LE6 453 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 CMTR2Q8IYT2 770 aaKnown RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 ABI1Q8IZP0 508 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 SP7Q8TDD2 431 aaPredicted RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 ZNF689Q96CS4 500 aaPredicted RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 SAMD11Q96NU1 681 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 MRPL4Q9BYD3 311 aaKnown RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 NKX2-4Q9H2Z4 354 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 YBX2Q9Y2T7 364 aaKnown RBP25.8■■□□□ 1.72
GLI3-202ENST00000428534 RWDD3Q9Y3V2 267 aa25.8■■□□□ 1.72
GLI3-202ENST00000428534 GBF1Q92538 1859 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 CA3P07451 260 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 TMCO2Q7Z6W1 182 aaPredicted RBP25.79■■□□□ 1.72
GLI3-202ENST00000428534 FIBCD1Q8N539 461 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 TMEM161BQ8NDZ6 487 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 DNAJC19Q96DA6 116 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 C7orf25Q9BPX7 421 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 KIFC3Q9BVG8 833 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 PCDHB2Q9Y5E7 798 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 TTC3P53804 2025 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 ADGRA3Q8IWK6 1321 aa25.79■■□□□ 1.72
GLI3-202ENST00000428534 IDEP14735 1019 aa25.78■■□□□ 1.72
GLI3-202ENST00000428534 LIG1P18858 919 aa25.78■■□□□ 1.72
GLI3-202ENST00000428534 ALCAMQ13740 583 aa25.78■■□□□ 1.72
GLI3-202ENST00000428534 BTG3Q14201 252 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms