RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IRAK3Q9Y616 596 aa18.52■□□□□ 0.56
VARS-216ENST00000428445 PLXNA3P51805 1871 aa18.52■□□□□ 0.55
VARS-216ENST00000428445 DMDP11532 3685 aa18.52■□□□□ 0.55
VARS-216ENST00000428445 CACNA1HO95180 2353 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 NRP1O14786 923 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 CNPP09543 421 aaKnown RBP18.51■□□□□ 0.55
VARS-216ENST00000428445 KLRC2P26717 231 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 LAMTOR4Q0VGL1 99 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 SCRN1Q12765 414 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 PPP2R5CQ13362 524 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 MRPL10Q7Z7H8 261 aaKnown RBP18.51■□□□□ 0.55
VARS-216ENST00000428445 FAM177A1Q8N128 213 aaPredicted RBP18.51■□□□□ 0.55
VARS-216ENST00000428445 PGBD4Q96DM1 585 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 DYDC2Q96IM9 177 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 DHX33Q9H6R0 707 aaKnown RBP18.51■□□□□ 0.55
VARS-216ENST00000428445 RSAD1Q9HA92 442 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 MIOSQ9NXC5 875 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 FAN1Q9Y2M0 1017 aa18.51■□□□□ 0.55
VARS-216ENST00000428445 ZFHX2Q9C0A1 2572 aaPredicted RBP18.51■□□□□ 0.55
VARS-216ENST00000428445 A0A087WWV3 80 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 F8W810 466 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 CCNT1O60563 726 aaKnown RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 GFRA3O60609 400 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 LILRB3O75022 631 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 ALDH2P05091 517 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 P4HBP07237 508 aaKnown RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 RAB27AP51159 221 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 CYP4A11Q02928 519 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 NCAPH2Q6IBW4 605 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 UBALD2Q8IYN6 164 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 ZDHHC14Q8IZN3 488 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 SMG8Q8ND04 991 aaKnown RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 URGCPQ8TCY9 931 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 SLC7A3Q8WY07 619 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 CPB2Q96IY4 423 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 FAM193BQ96PV7 902 aaPredicted RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 EIF2AQ9BY44 585 aaKnown RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 PRG3Q9Y2Y8 225 aaPredicted RBP18.5■□□□□ 0.55
VARS-216ENST00000428445 HES2Q9Y543 173 aa18.5■□□□□ 0.55
VARS-216ENST00000428445 CCDC194A0A1B0GVG4 234 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 SPDYE4A6NLX3 237 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 GALR2O43603 387 aaPredicted RBP18.49■□□□□ 0.55
VARS-216ENST00000428445 YWHABP31946 246 aaKnown RBP18.49■□□□□ 0.55
VARS-216ENST00000428445 CLCN4P51793 760 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 GIT2Q14161 759 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 GALNT17Q6IS24 598 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 NEK8Q86SG6 692 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 GPR149Q86SP6 731 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 RNF149Q8NC42 400 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 PSPC1Q8WXF1 523 aaKnown RBP18.49■□□□□ 0.55
VARS-216ENST00000428445 FAM20AQ96MK3 541 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 LXNQ9BS40 222 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 MARCH5Q9NX47 278 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 DENND4AQ7Z401 1863 aa18.49■□□□□ 0.55
VARS-216ENST00000428445 MARCH6O60337 910 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 EMC2Q15006 297 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 EPHA7Q15375 998 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 XKR9Q5GH70 373 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 FERMT3Q86UX7 667 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 JPH2Q9BR39 696 aaPredicted RBP18.48■□□□□ 0.55
VARS-216ENST00000428445 APOL6Q9BWW8 343 aa18.48■□□□□ 0.55
VARS-216ENST00000428445 ARID2Q68CP9 1835 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 PI15O43692 258 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 ST18O60284 1047 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 SPATA31D3P0C874 917 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
VARS-216ENST00000428445 OR1G1P47890 313 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 AK2P54819 239 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 PPP4R3AQ6IN85 833 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 CPLX2Q6PUV4 134 aaKnown RBP18.47■□□□□ 0.55
VARS-216ENST00000428445 SPATA31D4Q6ZUB0 917 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 ASCL5Q7RTU5 278 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 CDR2LQ86X02 465 aaPredicted RBP18.47■□□□□ 0.55
VARS-216ENST00000428445 TPH2Q8IWU9 490 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 C4orf19Q8IY42 314 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 PLCD3Q8N3E9 789 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 FLCNQ8NFG4 579 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 RABGGTAQ92696 567 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 B3GALT6Q96L58 329 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 ZFP42Q96MM3 310 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 GAD1Q99259 594 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 EMILIN2Q9BXX0 1053 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 TM6SF1Q9BZW5 370 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 SFXN1Q9H9B4 322 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 XPNPEP1Q9NQW7 623 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 MRPL17Q9NRX2 175 aaKnown RBP18.47■□□□□ 0.55
VARS-216ENST00000428445 TPCN1Q9ULQ1 816 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 IPPQ9Y573 584 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 VPS13AQ96RL7 3174 aa18.47■□□□□ 0.55
VARS-216ENST00000428445 TSPAN1O60635 241 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 N4BP1O75113 896 aaKnown RBP18.46■□□□□ 0.55
VARS-216ENST00000428445 SLITRK3O94933 977 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms