RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 ATP8B1O43520 1251 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 OATP04181 439 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 TUBBP07437 444 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 EDNRBP24530 442 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 MXI1P50539 228 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
PRDM5-203ENST00000428209 POMGNT1Q8WZA1 660 aa18.75■□□□□ 0.59
PRDM5-203ENST00000428209 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
PRDM5-203ENST00000428209 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
PRDM5-203ENST00000428209 LRRN2O75325 713 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 CNMDO75829 334 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 FTCDO95954 541 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 NOP2P46087 812 aaKnown RBP18.74■□□□□ 0.59
PRDM5-203ENST00000428209 VSNL1P62760 191 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 EMC2Q15006 297 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
PRDM5-203ENST00000428209 CCDC127Q96BQ5 260 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 TMEM117Q9H0C3 514 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 NENFQ9UMX5 172 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 KCNH4Q9UQ05 1017 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 FOXN3O00409 490 aaPredicted RBP18.74■□□□□ 0.59
PRDM5-203ENST00000428209 ERLIN1O75477 346 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 TBC1D8O95759 1140 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 SLC25A27O95847 323 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 H2AFZP0C0S5 128 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 PPIL2Q13356 520 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 LONRF2Q1L5Z9 754 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 SLC39A4Q6P5W5 647 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 H2AFVQ71UI9 128 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 HNRNPLLQ8WVV9 542 aaKnown RBP18.74■□□□□ 0.59
PRDM5-203ENST00000428209 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 BICD1Q96G01 975 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 R3HDMLQ9H3Y0 253 aa18.74■□□□□ 0.59
PRDM5-203ENST00000428209 H0YCG3 227 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 FARP2O94887 1054 aaPredicted RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 C2orf54Q08AI8 447 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 NEDD9Q14511 834 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 IFI16Q16666 785 aaKnown RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 BRDTQ58F21 947 aaPredicted RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 ARHGEF19Q8IW93 802 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 SLC30A5Q8TAD4 765 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 PARD3BQ8TEW8 1205 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 TMEM143Q96AN5 459 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 ARHGAP28Q9P2N2 729 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 GRID2IPA4D2P6 1211 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 MAP2K1Q02750 393 aaPredicted RBP18.73■□□□□ 0.59
PRDM5-203ENST00000428209 TXNRD2Q9NNW7 524 aa18.73■□□□□ 0.59
PRDM5-203ENST00000428209 IGKV6D-21A0A0A0MT36 114 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 PMM2O15305 246 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 TGFB3P10600 412 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 PAFAH1B1P43034 410 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 DNA2P51530 1060 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 MEI1Q5TIA1 1274 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 POP1Q99575 1024 aaKnown RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 INTUQ9ULD6 942 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 PGK2P07205 417 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 ABCD1P33897 745 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 MCCD1P59942 119 aaPredicted RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 Q3C1V9 767 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 KRT39Q6A163 491 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 WDR93Q6P2C0 686 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 FASTKD5Q7L8L6 764 aaKnown RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 TAS1R3Q7RTX0 852 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 SLC7A3Q8WY07 619 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 FBXL18Q96ME1 805 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 DHX33Q9H6R0 707 aaKnown RBP18.72■□□□□ 0.59
PRDM5-203ENST00000428209 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
PRDM5-203ENST00000428209 ATP8B3O60423 1300 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 LRRIQ3A6PVS8 624 aaPredicted RBP18.71■□□□□ 0.59
PRDM5-203ENST00000428209 SASH3O75995 380 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 TNFAIP3P21580 790 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 OSBPP22059 807 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 GARTP22102 1010 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 KIF22Q14807 665 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 BEND6Q5SZJ8 279 aaPredicted RBP18.71■□□□□ 0.59
PRDM5-203ENST00000428209 ARMC9Q7Z3E5 817 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 ZNF572Q7Z3I7 529 aaPredicted RBP18.71■□□□□ 0.59
PRDM5-203ENST00000428209 USP37Q86T82 979 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 GPD1LQ8N335 351 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 SPATA4Q8NEY3 305 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 MFSD14AQ96MC6 490 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 FUT8Q9BYC5 575 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 NIFKQ9BYG3 293 aaKnown RBP18.71■□□□□ 0.59
PRDM5-203ENST00000428209 PORCNQ9H237 461 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.71■□□□□ 0.59
PRDM5-203ENST00000428209 NRBP2Q9NSY0 501 aa18.71■□□□□ 0.59
PRDM5-203ENST00000428209 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms