RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 CAPSQ13938 189 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 SMAD2Q15796 467 aaKnown RBP16.83■□□□□ 0.28
PHF1-204ENST00000427826 DUSP6Q16828 381 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 TMC7Q7Z402 723 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 C4orf32Q8N8J7 132 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 TMEM169Q96HH4 297 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 KIAA1671Q9BY89 1806 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 POLR3FQ9H1D9 316 aaPredicted RBP16.83■□□□□ 0.28
PHF1-204ENST00000427826 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 TBC1D13Q9NVG8 400 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 STK39Q9UEW8 545 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
PHF1-204ENST00000427826 A0A087WWV3 80 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 ARHGEF35A5YM69 484 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 TSPAN1O60635 241 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.282e-10■■■□□ 16.8
PHF1-204ENST00000427826 EYA4O95677 639 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 GLRA2P23416 452 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 SSTR3P32745 418 aaPredicted RBP16.82■□□□□ 0.28
PHF1-204ENST00000427826 PBX3P40426 434 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 MBTD1Q05BQ5 628 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 COASYQ13057 564 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 PTGDRQ13258 359 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
PHF1-204ENST00000427826 CLUL1Q15846 466 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 PLPP4Q5VZY2 271 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 MCTP1Q6DN14 999 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 POTEGQ6S5H5 508 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 ADHFE1Q8IWW8 467 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 HACE1Q8IYU2 909 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 MSLNLQ96KJ4 702 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 TBC1D32Q96NH3 1257 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 POP1Q99575 1024 aaKnown RBP16.82■□□□□ 0.28
PHF1-204ENST00000427826 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
PHF1-204ENST00000427826 PCDHGC5Q9Y5F6 944 aa16.82■□□□□ 0.28
PHF1-204ENST00000427826 H3BQV1 296 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 PER2O15055 1255 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 MBTPS2O43462 519 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 ITGA4P13612 1032 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 CYP11B2P19099 503 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 CCT6AP40227 531 aaKnown RBP16.81■□□□□ 0.28
PHF1-204ENST00000427826 PRPHP41219 470 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
PHF1-204ENST00000427826 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 PADI6Q6TGC4 694 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 AGMOQ6ZNB7 445 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 MAEAQ7L5Y9 396 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 ZBTB8OSQ8IWT0 167 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 PRIMPOLQ96LW4 560 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 FAM193BQ96PV7 902 aaPredicted RBP16.81■□□□□ 0.28
PHF1-204ENST00000427826 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
PHF1-204ENST00000427826 CSRNP2Q9H175 543 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 C2orf40Q9H1Z8 148 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 NRDE2Q9H7Z3 1164 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 CLEC1BQ9P126 229 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
PHF1-204ENST00000427826 PCDHB6Q9Y5E3 794 aa16.81■□□□□ 0.28
PHF1-204ENST00000427826 LRRIQ4A6NIV6 560 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 MEIS3P2A8K0S8 358 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 ALDH2P05091 517 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 GALTP07902 379 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 GJB2P29033 226 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 ZP2Q05996 745 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 GIT2Q14161 759 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 NBR1Q14596 966 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 AMHR2Q16671 573 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 TMEM184AQ6ZMB5 413 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 DTHD1Q6ZMT9 781 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 DDX53Q86TM3 631 aaKnown RBP16.8■□□□□ 0.28
PHF1-204ENST00000427826 MRPL43Q8N983 215 aaKnown RBP16.8■□□□□ 0.28
PHF1-204ENST00000427826 IGSF21Q96ID5 467 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 CD320Q9NPF0 282 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
PHF1-204ENST00000427826 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 IPPQ9Y573 584 aa16.8■□□□□ 0.28
PHF1-204ENST00000427826 A0A1B0GUA9 196 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 NT5C1B-RDH14C9J2C7 533 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 GLP2RO95838 553 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 ARF4P18085 180 aaPredicted RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 CDCA2Q69YH5 1023 aaPredicted RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 SLC27A1Q6PCB7 646 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 SMRP1Q8NCR6 262 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 CPB2Q96IY4 423 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 TMEM175Q9BSA9 504 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 EIF2AQ9BY44 585 aaKnown RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 GPRC5CQ9NQ84 441 aa16.79■□□□□ 0.28
PHF1-204ENST00000427826 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
PHF1-204ENST00000427826 KIAA1024Q9UPX6 916 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms