RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 MTFR1Q15390 333 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 MIIPQ5JXC2 388 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 LHX8Q68G74 356 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 KIAA0319LQ8IZA0 1049 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 SAAL1Q96ER3 474 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
RFC4-206ENST00000427785 C2orf40Q9H1Z8 148 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 MINDY3Q9H8M7 445 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 ANKFY1Q9P2R3 1169 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
RFC4-206ENST00000427785 SMIM35A0A1B0GVV1 85 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 GOLGA8IPA6NC78 632 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 GOLGA8JA6NMD2 632 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 ASAP2O43150 1006 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 B4GALT5O43286 388 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 EXOC3O60645 756 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 CSDE1O75534 798 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 GNA14O95837 355 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 PIGRP01833 764 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 TPM3P06753 285 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 ADRB2P07550 413 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 TPM2P07951 284 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 HARSP12081 509 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 ABCD1P33897 745 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 EFNA5P52803 228 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 ACLYP53396 1101 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 PTENP60484 403 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 KIZQ2M2Z5 673 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 DCAF17Q5H9S7 520 aaPredicted RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 CTU1Q7Z7A3 348 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 VSTM4Q8IW00 320 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 C12orf56Q8IXR9 622 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 DNAJB3Q8WWF6 145 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 KCNN1Q92952 543 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 DMAC2Q9NW81 257 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
RFC4-206ENST00000427785 KCNG1Q9UIX4 513 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 GINS2Q9Y248 185 aa13.2□□□□□ -0.3
RFC4-206ENST00000427785 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 GNAT1P11488 350 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 CCL5P13501 91 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 ADSSP30520 456 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
RFC4-206ENST00000427785 LBX1P52954 281 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
RFC4-206ENST00000427785 MAPK6Q16659 721 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 WNT8BQ93098 351 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 OSMRQ99650 979 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
RFC4-206ENST00000427785 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 ARMCX3Q9UH62 379 aaPredicted RBP13.19□□□□□ -0.3
RFC4-206ENST00000427785 FRMD4BQ9Y2L6 1034 aa13.19□□□□□ -0.3
RFC4-206ENST00000427785 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 SCP2P22307 547 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 FGFR4P22455 802 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 UBXN1Q04323 297 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 NR1I3Q14994 352 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 TCERG1LQ5VWI1 586 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 FRMD5Q7Z6J6 570 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 ZNF410Q86VK4 478 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 ZBTB45Q96K62 511 aaPredicted RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 DEFB118Q96PH6 123 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 NFKBIZQ9BYH8 718 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 HAPLN2Q9GZV7 340 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms