RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CMTR1Q8N1G2 835 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 TNIP3Q96KP6 325 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ZNF512Q96ME7 567 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 PSMB7Q99436 277 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 FGFR1OP2Q9NVK5 253 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CNOT7Q9UIV1 285 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 ASAP1Q9ULH1 1129 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 TRAF3IP3Q9Y228 551 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ADCY9O60503 1353 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ECEL1O95672 775 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 PYGBP11216 843 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 DARSP14868 501 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 HLA-DPA1P20036 260 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 NR2F2P24468 414 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 INPP5BP32019 993 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 PRELPP51888 382 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 PEX3P56589 373 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 LAMB3Q13751 1172 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 TTC31Q49AM3 519 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OLFML1Q6UWY5 402 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ARHGAP18Q8N392 663 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OR9Q1Q8NGQ5 310 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CFAP61Q8NHU2 1237 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CENPTQ96BT3 561 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 NAF1Q96HR8 494 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 PIGSQ96S52 555 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 SERPINI1Q99574 410 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 UNC45AQ9H3U1 944 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 NCKAP1Q9Y2A7 1128 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 TEX28O15482 410 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ZSCAN9O15535 394 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 EGFRP00533 1210 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 PRAMEP78395 509 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 IL9RQ01113 521 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 AP3B2Q13367 1082 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 FLOT2Q14254 428 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 LRRC23Q53EV4 343 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 KRT80Q6KB66 452 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 FAM180AQ6UWF9 173 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 PODNQ7Z5L7 613 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 PPHLN1Q8NEY8 458 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 FAM227BQ96M60 508 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 GBP5Q96PP8 586 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 EMILIN2Q9BXX0 1053 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 SEZ6LQ9BYH1 1024 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 USP19O94966 1318 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 SYNGAP1Q96PV0 1343 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ENC1O14682 589 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 PSMD3O43242 534 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 BUB1O43683 1085 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 GSNP06396 782 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 HOXA13P31271 388 aaPredicted RBP6.09□□□□□ -1.44
HERC4-206ENST00000427635 IFNAR2P48551 515 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 HARS2P49590 506 aaKnown RBP6.09□□□□□ -1.44
HERC4-206ENST00000427635 TMEM132DQ14C87 1099 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 LONRF1Q17RB8 773 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 CEP55Q53EZ4 464 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 ANKRD40Q6AI12 368 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 RASSF3Q86WH2 238 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 NOSTRINQ8IVI9 506 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 SAMD14Q8IZD0 417 aaPredicted RBP6.09□□□□□ -1.44
HERC4-206ENST00000427635 GPRC5AQ8NFJ5 357 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 OSBPL10Q9BXB5 764 aa6.09□□□□□ -1.44
HERC4-206ENST00000427635 TMEM2Q9UHN6 1383 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PLXNC1O60486 1568 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PRR23AA6NEV1 266 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 A8MXQ7 604 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CLIC2O15247 247 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 DYNC1LI2O43237 492 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 AMHP03971 560 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 MAP2K2P36507 400 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 STAT3P40763 770 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 NR5A1Q13285 461 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 STARD3Q14849 445 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 TDRD10Q5VZ19 366 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 EXD1Q8NHP7 514 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 STAMQ92783 540 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ZNF274Q96GC6 653 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 TMEM169Q96HH4 297 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 TDRD3Q9H7E2 651 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 NGRNQ9NPE2 291 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 POLG2Q9UHN1 485 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 MAFFQ9ULX9 164 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 STK38LQ9Y2H1 464 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 MRPS23Q9Y3D9 190 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 JCADQ9P266 1359 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 C19orf81C9J6K1 198 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 VAMP4O75379 141 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PDE8BO95263 885 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 MT-ND3P03897 115 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 KRT8P05787 483 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SMARCA1P28370 1054 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 KCNH2Q12809 1159 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SPP2Q13103 211 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ERAP2Q6P179 960 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms