RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PER2O15055 1255 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 MUTP22033 750 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 MBTD1Q05BQ5 628 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 PDIA5Q14554 519 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 UBXN11Q5T124 520 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 PADI6Q6TGC4 694 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 TMC7Q7Z402 723 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 MRPL10Q7Z7H8 261 aaKnown RBP20.44■□□□□ 0.86
GPC1-205ENST00000427506 IFNLR1Q8IU57 520 aaPredicted RBP20.44■□□□□ 0.86
GPC1-205ENST00000427506 SLC39A11Q8N1S5 342 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 CNNM3Q8NE01 707 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 TMEM169Q96HH4 297 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 RSAD1Q9HA92 442 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 TBC1D13Q9NVG8 400 aa20.44■□□□□ 0.86
GPC1-205ENST00000427506 LAD1O00515 517 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 FSCN2O14926 492 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 TBX10O75333 385 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 ITGA4P13612 1032 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 SSTR3P32745 418 aaPredicted RBP20.43■□□□□ 0.86
GPC1-205ENST00000427506 CA8P35219 290 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 RILPL1Q5EBL4 403 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 DTHD1Q6ZMT9 781 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 AGMOQ6ZNB7 445 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 FAM178BQ8IXR5 827 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 SNX29Q8TEQ0 813 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 CCDC51Q96ER9 411 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 NFKBIZQ9BYH8 718 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 TRIM6Q9C030 488 aaPredicted RBP20.43■□□□□ 0.86
GPC1-205ENST00000427506 NGRNQ9NPE2 291 aaKnown RBP20.43■□□□□ 0.86
GPC1-205ENST00000427506 CD207Q9UJ71 328 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 KIAA1024Q9UPX6 916 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 CNTNAP2Q9UHC6 1331 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 TTC28Q96AY4 2481 aa20.43■□□□□ 0.86
GPC1-205ENST00000427506 FSD2A1L4K1 749 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 CARNS1A5YM72 827 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 BMS1Q14692 1282 aaKnown RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 ZBTB8OSQ8IWT0 167 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 IGSF22Q8N9C0 903 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 FAM193BQ96PV7 902 aaPredicted RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 CDCA3Q99618 268 aaPredicted RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 EIF2AQ9BY44 585 aaKnown RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 CSRNP2Q9H175 543 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 NRDE2Q9H7Z3 1164 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 UBN1Q9NPG3 1134 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 DDX19AQ9NUU7 478 aaKnown RBP20.42■□□□□ 0.86
GPC1-205ENST00000427506 IPPQ9Y573 584 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 MYO7AQ13402 2215 aa20.42■□□□□ 0.86
GPC1-205ENST00000427506 ARF4P18085 180 aaPredicted RBP20.41■□□□□ 0.86
GPC1-205ENST00000427506 CYP11B2P19099 503 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 PRPHP41219 470 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 ECM1Q16610 540 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 AMHR2Q16671 573 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 DUSP6Q16828 381 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 KRT79Q5XKE5 535 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 LARP1BQ659C4 914 aaKnown RBP20.41■□□□□ 0.86
GPC1-205ENST00000427506 HACE1Q8IYU2 909 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 GJD3Q8N144 294 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 SMG8Q8ND04 991 aaKnown RBP20.41■□□□□ 0.86
GPC1-205ENST00000427506 BHMT2Q9H2M3 363 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 KANSL3Q9P2N6 904 aa20.41■□□□□ 0.86
GPC1-205ENST00000427506 BARX2Q9UMQ3 279 aaPredicted RBP20.41■□□□□ 0.86
GPC1-205ENST00000427506 B4GALT5O43286 388 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 MBTPS2O43462 519 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 POMCP01189 267 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 SMAD4Q13485 552 aaKnown RBP20.4■□□□□ 0.86
GPC1-205ENST00000427506 SMC1AQ14683 1233 aaKnown RBP20.4■□□□□ 0.86
GPC1-205ENST00000427506 TMEM132AQ24JP5 1023 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 ZNF280BQ86YH2 543 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 APOL6Q9BWW8 343 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 C2orf40Q9H1Z8 148 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 BRWD1Q9NSI6 2320 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 PRMT7Q9NVM4 692 aaPredicted RBP20.4■□□□□ 0.86
GPC1-205ENST00000427506 CLEC1BQ9P126 229 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 DNAJB4Q9UDY4 337 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 HES2Q9Y543 173 aa20.4■□□□□ 0.86
GPC1-205ENST00000427506 PP2D1A8MPX8 630 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 HIDE1A8MVS5 230 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 GLP2RO95838 553 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 GALTP07902 379 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 SRGAP2BP0DMP2 458 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 SLC11A1P49279 550 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 SLC27A1Q6PCB7 646 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 CDR2LQ86X02 465 aaPredicted RBP20.39■□□□□ 0.85
GPC1-205ENST00000427506 VPS52Q8N1B4 723 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 DEPTORQ8TB45 409 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 MSLNLQ96KJ4 702 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 IFT74Q96LB3 600 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 CD320Q9NPF0 282 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 PRKAG3Q9UGI9 489 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 DNM3Q9UQ16 869 aa20.39■□□□□ 0.85
GPC1-205ENST00000427506 DDHD2O94830 711 aa20.38■□□□□ 0.85
GPC1-205ENST00000427506 NPTXRO95502 500 aa20.38■□□□□ 0.85
GPC1-205ENST00000427506 CXCL14O95715 111 aa20.38■□□□□ 0.85
GPC1-205ENST00000427506 ALDH2P05091 517 aa20.38■□□□□ 0.85
GPC1-205ENST00000427506 LIG1P18858 919 aa20.38■□□□□ 0.85
GPC1-205ENST00000427506 CDC25AP30304 524 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms