RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LRRN2O75325 713 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 CNGA1P29973 690 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 ICAM3P32942 547 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 XKR3Q5GH77 459 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 HDXQ7Z353 690 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 NCAPG2Q86XI2 1143 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 GLYCTKQ8IVS8 523 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 ARHGEF19Q8IW93 802 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 OLIG1Q8TAK6 271 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 OTUD5Q96G74 571 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 ZNF302Q9NR11 478 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 INTUQ9ULD6 942 aa15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 PACSIN2Q9UNF0 486 aaPredicted RBP15.19■□□□□ 0.02
APOBEC3D-202ENST00000427494 MAP2K7O14733 419 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 RTP1P59025 263 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SLC39A4Q6P5W5 647 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 MS4A14Q96JA4 679 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 PAGR1Q9BTK6 254 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SPATC1LQ9H0A9 340 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 TMEM117Q9H0C3 514 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 A0A0G2JLL6 359 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 FOXN3O00409 490 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 IRF6O14896 467 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 KIF22Q14807 665 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 PRRT2Q7Z6L0 340 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 ZNF526Q8TF50 670 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 POMGNT1Q8WZA1 660 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 BICD1Q96G01 975 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SYT11Q9BT88 431 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SUGCTQ9HAC7 445 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 L1RE1Q9UN81 338 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
APOBEC3D-202ENST00000427494 A0A0A6YYK5 440 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 ZMYND10O75800 440 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 OATP04181 439 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 TNFAIP3P21580 790 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 POLGP54098 1239 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 GALCP54803 685 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 PPATQ06203 517 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 GABPB1Q06547 395 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 EMC2Q15006 297 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 TPCN2Q8NHX9 752 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 TAF4BQ92750 862 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 CCDC127Q96BQ5 260 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
APOBEC3D-202ENST00000427494 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 LRRIQ3A6PVS8 624 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 H0YCG3 227 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 PMM2O15305 246 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 ATG7O95352 703 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 ATP4AP20648 1035 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 UBA1P22314 1058 aaKnown RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 RPS6KA1Q15418 735 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 ERO1BQ86YB8 467 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 LRRC57Q8N9N7 239 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 MAFBQ9Y5Q3 323 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 LRRC37A2A6NM11 1700 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 MCCD1P59942 119 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 TAS1R3Q7RTX0 852 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 PARD3BQ8TEW8 1205 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 CDCA5Q96FF9 252 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 LRRC1Q9BTT6 524 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 UBXN6Q9BZV1 441 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 ASCC2Q9H1I8 757 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 GOLPH3Q9H4A6 298 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 RBM12Q9NTZ6 932 aaKnown RBP15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 ARHGAP28Q9P2N2 729 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 NCANO14594 1321 aa15.16■□□□□ 0.02
APOBEC3D-202ENST00000427494 KIF4AO95239 1232 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 GARTP22102 1010 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 EDNRBP24530 442 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 NF2P35240 595 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 CYP24A1Q07973 514 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 KRT39Q6A163 491 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 ANKRD13AQ8IZ07 590 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms