RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 HOXA2O43364 376 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 TBCAO75347 108 aaKnown RBP27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 FAM13AO94988 1023 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 EOMESO95936 686 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 ARF4P18085 180 aaPredicted RBP27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 GIT2Q14161 759 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 ADALQ6DHV7 355 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 ZNF598Q86UK7 904 aaKnown RBP27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 CMTR2Q8IYT2 770 aaKnown RBP27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 CPB2Q96IY4 423 aa27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 RBM19Q9Y4C8 960 aaKnown RBP27.73■■■□□ 2.03
HERPUD2-205ENST00000427455 ACKR2O00590 384 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 ATF7P17544 494 aaPredicted RBP27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 ZNF131P52739 623 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 SMTNP53814 917 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 BTG3Q14201 252 aaPredicted RBP27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 IQUBQ8NA54 791 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 RNF169Q8NCN4 708 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 DHX58Q96C10 678 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 NTPCRQ9BSD7 190 aaKnown RBP27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 PARVGQ9HBI0 331 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 MTMR10Q9NXD2 777 aa27.72■■■□□ 2.03
HERPUD2-205ENST00000427455 ZNF623O75123 536 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 FGFR1P11362 822 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 LIG1P18858 919 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 PRPF4BQ13523 1007 aaKnown RBP27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 UBXN11Q5T124 520 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 FIBCD1Q8N539 461 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 TGS1Q96RS0 853 aaKnown RBP27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 PYM1Q9BRP8 204 aaKnown RBP27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 TNMDQ9H2S6 317 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 TMEM134Q9H6X4 195 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 PCDHB2Q9Y5E7 798 aa27.71■■■□□ 2.03
HERPUD2-205ENST00000427455 FNDC1Q4ZHG4 1894 aaPredicted RBP27.7■■■□□ 2.03
HERPUD2-205ENST00000427455 A0A1B0GUA9 196 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 MYMKA6NI61 221 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 K7ERI5 159 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 SLC16A4O15374 487 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 GATMP50440 423 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 GRIN2CQ14957 1233 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 DDX12PQ92771 950 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 MAGEF1Q9HAY2 307 aa27.7■■■□□ 2.02
HERPUD2-205ENST00000427455 H0YCG3 227 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 POLR2DO15514 142 aaKnown RBP27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 CMA1P23946 247 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 NCKAP1LP55160 1127 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 ERVK-21P61565 698 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 PAN2Q504Q3 1202 aaKnown RBP27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 SLC27A1Q6PCB7 646 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 DYMQ7RTS9 669 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 SPRED2Q7Z698 418 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 ABI1Q8IZP0 508 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 MYCT1Q8N699 235 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 TMEM161BQ8NDZ6 487 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 CNNM3Q8NE01 707 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 PGBD4Q96DM1 585 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 GUCD1Q96NT3 240 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 SAMD11Q96NU1 681 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 EIF2AQ9BY44 585 aaKnown RBP27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 TMEM117Q9H0C3 514 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 ZHX3Q9H4I2 956 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 GDPD2Q9HCC8 539 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 RNF19AQ9NV58 838 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 KCNH3Q9ULD8 1083 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 RALGAPA2Q2PPJ7 1873 aa27.69■■■□□ 2.02
HERPUD2-205ENST00000427455 TBKBP1A7MCY6 615 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 N4BP3O15049 544 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 EDN1P05305 212 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 TMEM132AQ24JP5 1023 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 RSPH1Q8WYR4 309 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 TRIM6Q9C030 488 aaPredicted RBP27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 LRRC27Q9C0I9 530 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 CERS4Q9HA82 394 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 KBTBD4Q9NVX7 518 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 NLRC5Q86WI3 1866 aa27.68■■■□□ 2.02
HERPUD2-205ENST00000427455 TTLL13PA6NNM8 815 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 MAPTP10636 758 aaKnown RBP27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 SCP2P22307 547 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 CLLU1OSQ5K130 101 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 TAS1R3Q7RTX0 852 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 MRPL10Q7Z7H8 261 aaKnown RBP27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 ARNTL2Q8WYA1 636 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 KCNN1Q92952 543 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 CLP1Q92989 425 aaKnown RBP27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 DNAJC19Q96DA6 116 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 C17orf80Q9BSJ5 609 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 PDZD7Q9H5P4 517 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 CHMP5Q9NZZ3 219 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 MTUS1Q9ULD2 1270 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 RWDD3Q9Y3V2 267 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 IPPQ9Y573 584 aa27.67■■■□□ 2.02
HERPUD2-205ENST00000427455 A0A1W2PQ27 194 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 A0A1W2PQ64 194 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 A0A1W2PQD8 194 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 TRAK2O60296 914 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 PFKFB1P16118 471 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 AMPD3Q01432 767 aa27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 CDR2LQ86X02 465 aaPredicted RBP27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 SMG8Q8ND04 991 aaKnown RBP27.66■■■□□ 2.02
HERPUD2-205ENST00000427455 LPPQ93052 612 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms