RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 NXPE3Q969Y0 559 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 JPH2Q9BR39 696 aaPredicted RBP16.45■□□□□ 0.22
PDAP1-202ENST00000426447 TBC1D17Q9HA65 648 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 MED19A0JLT2 244 aaPredicted RBP16.44■□□□□ 0.22
PDAP1-202ENST00000426447 INPPL1O15357 1258 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 B4GALT3O60512 393 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 MAFO75444 373 aaPredicted RBP16.44■□□□□ 0.22
PDAP1-202ENST00000426447 GLUD1P00367 558 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 SOD2P04179 222 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 DCNP07585 359 aaKnown RBP16.44■□□□□ 0.22
PDAP1-202ENST00000426447 SRFP11831 508 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 KRT32Q14532 448 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 PUM1Q14671 1186 aaKnown RBP eCLIP16.44■□□□□ 0.228e-11■□□□□ 9.9
PDAP1-202ENST00000426447 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 CCDC148Q8NFR7 591 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
PDAP1-202ENST00000426447 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 CLUHO75153 1309 aa16.44■□□□□ 0.22
PDAP1-202ENST00000426447 TEX28O15482 410 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
PDAP1-202ENST00000426447 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 OR1G1P47890 313 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 AFF1P51825 1210 aaKnown RBP16.43■□□□□ 0.22
PDAP1-202ENST00000426447 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 TAS1R1Q7RTX1 841 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 MRPL10Q7Z7H8 261 aaKnown RBP16.43■□□□□ 0.22
PDAP1-202ENST00000426447 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 PHKBQ93100 1093 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 MYADMQ96S97 322 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 CEP89Q96ST8 783 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 PRG3Q9Y2Y8 225 aaPredicted RBP16.43■□□□□ 0.22
PDAP1-202ENST00000426447 CNTNAP2Q9UHC6 1331 aa16.43■□□□□ 0.22
PDAP1-202ENST00000426447 NR1I2O75469 434 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 RFPL2O75678 378 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 PSMD10O75832 226 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 STBD1O95210 358 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 SRGAP2CP0DJJ0 459 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 GLUD2P49448 558 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 NLRP5P59047 1200 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 C1orf210Q8IVY1 113 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 RUBCNQ92622 972 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 HERC2P3Q9BVR0 1158 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 IFT122Q9HBG6 1241 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDAP1-202ENST00000426447 COL4A3BPQ9Y5P4 624 aa16.42■□□□□ 0.22
PDAP1-202ENST00000426447 GAS2O43903 313 aaKnown RBP16.41■□□□□ 0.22
PDAP1-202ENST00000426447 SP9P0CG40 484 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 ITGA4P13612 1032 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 PSMC5P62195 406 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 Q4G0T1 1027 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 Q6ZUG5 572 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 SRGAP1Q7Z6B7 1085 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 SLC26A6Q9BXS9 759 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 RHOBTB2Q9BYZ6 727 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 ARHGEF3Q9NR81 526 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
PDAP1-202ENST00000426447 EDIL3O43854 480 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 LAMP2P13473 410 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 KIAA0319Q5VV43 1072 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 PLA2G4FQ68DD2 849 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 ANO5Q75V66 913 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 GET4Q7L5D6 327 aaPredicted RBP16.4■□□□□ 0.22
PDAP1-202ENST00000426447 EXOC8Q8IYI6 725 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 HDAC7Q8WUI4 952 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 PRPF31Q8WWY3 499 aaKnown RBP16.4■□□□□ 0.22
PDAP1-202ENST00000426447 BRF1Q92994 677 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 COLEC11Q9BWP8 271 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 NT5C3AQ9H0P0 336 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 SLKQ9H2G2 1235 aaPredicted RBP16.4■□□□□ 0.22
PDAP1-202ENST00000426447 PLEKHA4Q9H4M7 779 aa16.4■□□□□ 0.22
PDAP1-202ENST00000426447 CPA1P15085 419 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
PDAP1-202ENST00000426447 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
PDAP1-202ENST00000426447 UBXN11Q5T124 520 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 GLYCTKQ8IVS8 523 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 COLGALT2Q8IYK4 626 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 ST13P5Q8NFI4 369 aaPredicted RBP16.39■□□□□ 0.21
PDAP1-202ENST00000426447 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
PDAP1-202ENST00000426447 TMEM143Q96AN5 459 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 SHDQ96IW2 340 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
PDAP1-202ENST00000426447 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 MARCH5Q9NX47 278 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.21
PDAP1-202ENST00000426447 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms