RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 PSPC1Q8WXF1 523 aaKnown RBP17.17■□□□□ 0.34
SHOX2-202ENST00000425436 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 OSMRQ99650 979 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 ADAMTS10Q9H324 1103 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 THAP9Q9H5L6 903 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 KCND1Q9NSA2 647 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 COL4A3BPQ9Y5P4 624 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 A0A087WZ62 844 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 GAS2O43903 313 aaKnown RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 HIP1RO75146 1068 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 CSDE1O75534 798 aaKnown RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 EEF1GP26641 437 aaKnown RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 GPC3P51654 580 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 EPHB4P54760 987 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 FPGSQ05932 587 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 VWCEQ96DN2 955 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 SCLT1Q96NL6 688 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 FDXACB1Q9BRP7 624 aaPredicted RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 TANC1Q9C0D5 1861 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 MYMKA6NI61 221 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 CCP110O43303 1012 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 KIF20AO95235 890 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 RPLP2P05387 115 aaKnown RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 GHRP10912 638 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 GLRA2P23416 452 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 CCNE1P24864 410 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 LRMPQ12912 555 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 BSNDQ8WZ55 320 aa17.16■□□□□ 0.34
SHOX2-202ENST00000425436 MAGEC2Q9UBF1 373 aaPredicted RBP17.16■□□□□ 0.34
SHOX2-202ENST00000425436 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
SHOX2-202ENST00000425436 TPM2P07951 284 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 CRYBB1P53674 252 aaPredicted RBP17.15■□□□□ 0.34
SHOX2-202ENST00000425436 LPIN1Q14693 890 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 TCP11X2Q5H9J9 407 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
SHOX2-202ENST00000425436 CCDC65Q8IXS2 484 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 DAW1Q8N136 415 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 DDX12PQ92771 950 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 P2RX5Q93086 422 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 AGO3Q9H9G7 860 aaKnown RBP17.15■□□□□ 0.34
SHOX2-202ENST00000425436 NOC2LQ9Y3T9 749 aaKnown RBP17.15■□□□□ 0.34
SHOX2-202ENST00000425436 MYH11P35749 1972 aa17.15■□□□□ 0.34
SHOX2-202ENST00000425436 ASAP2O43150 1006 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 FGFR4P22455 802 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 GUCY2CP25092 1073 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 MAPK7Q13164 816 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 TBX2Q13207 712 aaPredicted RBP17.14■□□□□ 0.33
SHOX2-202ENST00000425436 CAPSQ13938 189 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 GIT2Q14161 759 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
SHOX2-202ENST00000425436 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
SHOX2-202ENST00000425436 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 IL23AQ9NPF7 189 aa17.14■□□□□ 0.33
SHOX2-202ENST00000425436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHOX2-202ENST00000425436 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 TUBB4AP04350 444 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 TPM1P09493 284 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 CD52P31358 61 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 RFC2P35250 354 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 CCZ1BP86790 482 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
SHOX2-202ENST00000425436 CDC42EP1Q00587 391 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHOX2-202ENST00000425436 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 APTXQ7Z2E3 356 aaKnown RBP17.13■□□□□ 0.33
SHOX2-202ENST00000425436 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
SHOX2-202ENST00000425436 KIFAP3Q92845 792 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 INTS13Q9NVM9 706 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 KCND2Q9NZV8 630 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 ITIH6Q6UXX5 1313 aa17.13■□□□□ 0.33
SHOX2-202ENST00000425436 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 LRRIQ4A6NIV6 560 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 N4BP3O15049 544 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 PARNO95453 639 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 CXCL10P02778 98 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 DARSP14868 501 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 PEX3P56589 373 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
SHOX2-202ENST00000425436 STK4Q13043 487 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 TRIM14Q14142 442 aa17.12■□□□□ 0.33
SHOX2-202ENST00000425436 TTI2Q6NXR4 508 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms