RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 LENG9Q96B70 501 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 WNT16Q9UBV4 365 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 C2CD2LO14523 706 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NRP1O14786 923 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 GLUD1P00367 558 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 C1RP00736 705 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SOD2P04179 222 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 AOC1P19801 751 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 HSPA4P34932 840 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CLCN4P51793 760 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZC3H14Q6PJT7 736 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CCDC51Q96ER9 411 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 KCNK12Q9HB15 430 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DUSP12Q9UNI6 340 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TECTAO75443 2155 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 POMCP01189 267 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ID4P47928 161 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 GLUD2P49448 558 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DRP2Q13474 957 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NOTUMQ6P988 496 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ADSSL1Q8N142 457 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SIX5Q8N196 739 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 BORCS6Q96GS4 357 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SHDQ96IW2 340 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 RPS6KC1Q96S38 1066 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DNAJB4Q9UDY4 337 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SNX14Q9Y5W7 946 aa13.69□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TBX3O15119 743 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TDP2O95551 362 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CPA1P15085 419 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 EPHA7Q15375 998 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ANGPT1Q15389 498 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NTRK3Q16288 839 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ANO5Q75V66 913 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ASCL5Q7RTU5 278 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 FRMD5Q7Z6J6 570 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZNF280BQ86YH2 543 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 KSR1Q8IVT5 923 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 C4orf19Q8IY42 314 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DTWD2Q8NBA8 298 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SMG7Q92540 1137 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 WASF1Q92558 559 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 KCNB2Q92953 911 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 MTRQ99707 1265 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 SH2D3AQ9BRG2 576 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 RHOBTB2Q9BYZ6 727 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 WDR6Q9NNW5 1121 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 MAN1C1Q9NR34 630 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB3-203ENST00000425319 INO80B-WBP1J3KQ70 363 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 INPPL1O15357 1258 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TADA2AO75478 443 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DDHD2O94830 711 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 EVCP57679 992 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PPP2R5CQ13362 524 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 USP41Q3LFD5 358 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 HINFPQ9BQA5 517 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
HLA-DQB3-203ENST00000425319 PRG3Q9Y2Y8 225 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms