RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 C4orf19Q8IY42 314 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-209ENST00000425239 SMG8Q8ND04 991 aaKnown RBP16.78■□□□□ 0.28
ATG4B-209ENST00000425239 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 INPP5FQ9Y2H2 1132 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 NRP1O14786 923 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 INPPL1O15357 1258 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 GALR2O43603 387 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-209ENST00000425239 ST18O60284 1047 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 DTNBO60941 627 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 LAMTOR4Q0VGL1 99 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 LETM2Q2VYF4 491 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 TMC5Q6UXY8 1006 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 SRGAP1Q7Z6B7 1085 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 PGBD4Q96DM1 585 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 JPH2Q9BR39 696 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-209ENST00000425239 TMEM175Q9BSA9 504 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 PPME1Q9Y570 386 aa16.77■□□□□ 0.28
ATG4B-209ENST00000425239 DNAH14Q0VDD8 3507 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 TBX3O15119 743 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 SLITRK3O94933 977 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 PAPLNO95428 1278 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 ALDH2P05091 517 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
ATG4B-209ENST00000425239 SCRN1Q12765 414 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 STK3Q13188 491 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 BMS1Q14692 1282 aaKnown RBP16.76■□□□□ 0.27
ATG4B-209ENST00000425239 EPHA7Q15375 998 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 ZBTB33Q86T24 672 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 CEP170P1Q96L14 293 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 GBP3Q9H0R5 595 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 RSAD1Q9HA92 442 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 XPNPEP1Q9NQW7 623 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 MARCH5Q9NX47 278 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 MIOSQ9NXC5 875 aa16.76■□□□□ 0.27
ATG4B-209ENST00000425239 CPLX1O14810 134 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
ATG4B-209ENST00000425239 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 NPR3P17342 541 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 YWHABP31946 246 aaKnown RBP16.75■□□□□ 0.27
ATG4B-209ENST00000425239 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
ATG4B-209ENST00000425239 KIAA0319Q5VV43 1072 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 PPFIBP1Q86W92 1011 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 COLGALT2Q8IYK4 626 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 SLC7A3Q8WY07 619 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 ATOH1Q92858 354 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-209ENST00000425239 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 IRF2BPLQ9H1B7 796 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 KANSL3Q9P2N6 904 aa16.75■□□□□ 0.27
ATG4B-209ENST00000425239 DBR1Q9UK59 544 aaKnown RBP16.75■□□□□ 0.27
ATG4B-209ENST00000425239 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 FRYLO94915 3013 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 ASAP2O43150 1006 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 GFRA3O60609 400 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 POMCP01189 267 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 FDPSP14324 419 aaKnown RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 GCFC2P16383 781 aaKnown RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 CA8P35219 290 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 RFC5P40937 340 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 DSC1Q08554 894 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 AMHR2Q16671 573 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 C15orf39Q6ZRI6 1047 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 CABP7Q86V35 215 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 IFNLR1Q8IU57 520 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 TDRD5Q8NAT2 981 aaKnown RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 GSTCDQ8NEC7 633 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 PSPC1Q8WXF1 523 aaKnown RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 LXNQ9BS40 222 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 EIF2AQ9BY44 585 aaKnown RBP16.74■□□□□ 0.27
ATG4B-209ENST00000425239 SFXN1Q9H9B4 322 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 FAN1Q9Y2M0 1017 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
ATG4B-209ENST00000425239 FAM205CA6NFA0 338 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 F8W810 466 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
ATG4B-209ENST00000425239 TSPAN1O60635 241 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 DKC1O60832 514 aaKnown RBP eCLIP16.73■□□□□ 0.27
ATG4B-209ENST00000425239 SOD2P04179 222 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 NBL1P41271 181 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 CLCN5P51795 746 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 PTENP60484 403 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 EMC2Q15006 297 aa16.73■□□□□ 0.27
ATG4B-209ENST00000425239 CWF19L1Q69YN2 538 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms