RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 NRDE2Q9H7Z3 1164 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 FAM50BQ9Y247 325 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 KIF3AQ9Y496 699 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 NCLP19338 710 aaKnown RBP23.91■■□□□ 1.42
CDCP1-202ENST00000425231 MUTP22033 750 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 MCM2P49736 904 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 AFF1P51825 1210 aaKnown RBP23.91■■□□□ 1.42
CDCP1-202ENST00000425231 PDIA5Q14554 519 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 ECM1Q16610 540 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 DUSP6Q16828 381 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 GJD3Q8N144 294 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 SMG8Q8ND04 991 aaKnown RBP23.91■■□□□ 1.42
CDCP1-202ENST00000425231 NGRNQ9NPE2 291 aaKnown RBP23.91■■□□□ 1.42
CDCP1-202ENST00000425231 CD207Q9UJ71 328 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 INPP5FQ9Y2H2 1132 aa23.91■■□□□ 1.42
CDCP1-202ENST00000425231 ZC3H11AO75152 810 aaKnown RBP eCLIP23.9■■□□□ 1.42
CDCP1-202ENST00000425231 EYA4O95677 639 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 GJB2P29033 226 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 SMAD2Q15796 467 aaKnown RBP23.9■■□□□ 1.42
CDCP1-202ENST00000425231 PLPP4Q5VZY2 271 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 HAUS3Q68CZ6 603 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 TMEM173Q86WV6 379 aaPredicted RBP23.9■■□□□ 1.42
CDCP1-202ENST00000425231 IGSF22Q8N9C0 903 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 MCPH1Q8NEM0 835 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 VN1R2Q8NFZ6 395 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 CPB2Q96IY4 423 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 CDCA3Q99618 268 aaPredicted RBP23.9■■□□□ 1.42
CDCP1-202ENST00000425231 EIF2AQ9BY44 585 aaKnown RBP23.9■■□□□ 1.42
CDCP1-202ENST00000425231 RSAD1Q9HA92 442 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 LRWD1Q9UFC0 647 aa23.9■■□□□ 1.42
CDCP1-202ENST00000425231 HIDE1A8MVS5 230 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 GALTP07902 379 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 ARF4P18085 180 aaPredicted RBP23.89■■□□□ 1.41
CDCP1-202ENST00000425231 RBM10P98175 930 aaKnown RBP23.89■■□□□ 1.41
CDCP1-202ENST00000425231 COASYQ13057 564 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 SMAD4Q13485 552 aaKnown RBP23.89■■□□□ 1.41
CDCP1-202ENST00000425231 KCNC3Q14003 757 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 NOTUMQ6P988 496 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 PADI6Q6TGC4 694 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 TMC7Q7Z402 723 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 ZNF280BQ86YH2 543 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 CNNM3Q8NE01 707 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 CCDC51Q96ER9 411 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 CSRNP2Q9H175 543 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 EPHX3Q9H6B9 360 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 ENTPD7Q9NQZ7 604 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.89■■□□□ 1.41
CDCP1-202ENST00000425231 DNAJB4Q9UDY4 337 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 PRKAG3Q9UGI9 489 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 BARX2Q9UMQ3 279 aaPredicted RBP23.89■■□□□ 1.41
CDCP1-202ENST00000425231 IPPQ9Y573 584 aa23.89■■□□□ 1.41
CDCP1-202ENST00000425231 CNTNAP2Q9UHC6 1331 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 B4GALT3O60512 393 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 CYP11B2P19099 503 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 CCT6AP40227 531 aaKnown RBP23.88■■□□□ 1.41
CDCP1-202ENST00000425231 ZP2Q05996 745 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 NCBP1Q09161 790 aaKnown RBP23.88■■□□□ 1.41
CDCP1-202ENST00000425231 IL17AQ16552 155 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 MCTP1Q6DN14 999 aa23.88■■□□□ 1.41
CDCP1-202ENST00000425231 LAD1O00515 517 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 B4GALT5O43286 388 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 DDHD2O94830 711 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 RNASELQ05823 741 aaKnown RBP23.87■■□□□ 1.41
CDCP1-202ENST00000425231 MRPL43Q8N983 215 aaKnown RBP23.87■■□□□ 1.41
CDCP1-202ENST00000425231 SMRP1Q8NCR6 262 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 URGCPQ8TCY9 931 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 TMEM169Q96HH4 297 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 IGSF21Q96ID5 467 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 RNF39Q9H2S5 420 aa23.87■■□□□ 1.41
CDCP1-202ENST00000425231 FSD2A1L4K1 749 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 ARHGEF35A5YM69 484 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 CARNS1A5YM72 827 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 LRRIQ4A6NIV6 560 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 C19orf67A6NJJ6 358 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 ITGA4P13612 1032 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 PRPHP41219 470 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 SLC11A1P49279 550 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 CDCA2Q69YH5 1023 aaPredicted RBP23.86■■□□□ 1.41
CDCP1-202ENST00000425231 TMEM184AQ6ZMB5 413 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 ADHFE1Q8IWW8 467 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 BCL7CQ8WUZ0 217 aaPredicted RBP23.86■■□□□ 1.41
CDCP1-202ENST00000425231 BSNDQ8WZ55 320 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 GBP3Q9H0R5 595 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 UBN1Q9NPG3 1134 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 KANSL3Q9P2N6 904 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 KIAA1024Q9UPX6 916 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 HES2Q9Y543 173 aa23.86■■□□□ 1.41
CDCP1-202ENST00000425231 A0A1B0GUA9 196 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 C2orf71A6NGG8 1288 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 SSTR3P32745 418 aaPredicted RBP23.85■■□□□ 1.41
CDCP1-202ENST00000425231 SMC1AQ14683 1233 aaKnown RBP23.85■■□□□ 1.41
CDCP1-202ENST00000425231 RILPL1Q5EBL4 403 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 RAB34Q9BZG1 259 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 BHMT2Q9H2M3 363 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 FZD8Q9H461 694 aa23.85■■□□□ 1.41
CDCP1-202ENST00000425231 PP2D1A8MPX8 630 aa23.84■■□□□ 1.41
CDCP1-202ENST00000425231 INPPL1O15357 1258 aa23.84■■□□□ 1.41
CDCP1-202ENST00000425231 POMCP01189 267 aa23.84■■□□□ 1.41
CDCP1-202ENST00000425231 PPP4R3CPQ6ZMV5 832 aa23.84■■□□□ 1.41
CDCP1-202ENST00000425231 DDX53Q86TM3 631 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms