RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 AFF1P51825 1210 aaKnown RBP18.02■□□□□ 0.48
DDR1-234ENST00000424544 CYP4A11Q02928 519 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 PCBP1Q15365 356 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDR1-234ENST00000424544 CALCRLQ16602 461 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 GLB1LQ6UWU2 654 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 TMC7Q7Z402 723 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
DDR1-234ENST00000424544 RNF149Q8NC42 400 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 IGSF21Q96ID5 467 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 TMEM60Q9H2L4 133 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 MUTYHQ9UIF7 546 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 INPPL1O15357 1258 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 CLASP2O75122 1294 aaKnown RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 SPATA31C1P0DKV0 1188 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 MXD4Q14582 209 aaPredicted RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 SMC1AQ14683 1233 aaKnown RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 ZNF280BQ86YH2 543 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 SMG8Q8ND04 991 aaKnown RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 LLPHQ9BRT6 129 aaKnown RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 NFKBIZQ9BYH8 718 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
DDR1-234ENST00000424544 HCFC2Q9Y5Z7 792 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 MUC6Q6W4X9 2439 aa18.01■□□□□ 0.47
DDR1-234ENST00000424544 DGAT1O75907 488 aa18■□□□□ 0.47
DDR1-234ENST00000424544 DDHD2O94830 711 aa18■□□□□ 0.47
DDR1-234ENST00000424544 CXCL14O95715 111 aa18■□□□□ 0.47
DDR1-234ENST00000424544 CTSAP10619 480 aa18■□□□□ 0.47
DDR1-234ENST00000424544 TECP42680 631 aa18■□□□□ 0.47
DDR1-234ENST00000424544 TXKP42681 527 aa18■□□□□ 0.47
DDR1-234ENST00000424544 RARRES1P49788 294 aa18■□□□□ 0.47
DDR1-234ENST00000424544 AMHR2Q16671 573 aa18■□□□□ 0.47
DDR1-234ENST00000424544 LONRF3Q496Y0 759 aa18■□□□□ 0.47
DDR1-234ENST00000424544 BCL7CQ8WUZ0 217 aaPredicted RBP18■□□□□ 0.47
DDR1-234ENST00000424544 EDAQ92838 391 aa18■□□□□ 0.47
DDR1-234ENST00000424544 TMEM169Q96HH4 297 aa18■□□□□ 0.47
DDR1-234ENST00000424544 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
DDR1-234ENST00000424544 MTRQ99707 1265 aa18■□□□□ 0.47
DDR1-234ENST00000424544 VN1R3Q9BXE9 311 aa18■□□□□ 0.47
DDR1-234ENST00000424544 DNAJB4Q9UDY4 337 aa18■□□□□ 0.47
DDR1-234ENST00000424544 HCN4Q9Y3Q4 1203 aa18■□□□□ 0.47
DDR1-234ENST00000424544 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
DDR1-234ENST00000424544 NEMFO60524 1076 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 LILRB3O75022 631 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 EFEMP2O95967 443 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
DDR1-234ENST00000424544 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
DDR1-234ENST00000424544 VPS52Q8N1B4 723 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 CNNM3Q8NE01 707 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 ASAP3Q8TDY4 903 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 BMP2KQ9NSY1 1161 aaPredicted RBP17.99■□□□□ 0.47
DDR1-234ENST00000424544 KANSL3Q9P2N6 904 aa17.99■□□□□ 0.47
DDR1-234ENST00000424544 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 ZNF318Q5VUA4 2279 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 TSPAN1O60635 241 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
DDR1-234ENST00000424544 GLRA2P23416 452 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 AXLP30530 894 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 SLC11A1P49279 550 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 MBTD1Q05BQ5 628 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 BMP8AQ7Z5Y6 402 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 CATSPER3Q86XQ3 398 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 SLC22A17Q8WUG5 538 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 CASP10Q92851 521 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 FAM122AQ96E09 287 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 CCDC51Q96ER9 411 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 TMEM175Q9BSA9 504 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 ADAM7Q9H2U9 754 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
DDR1-234ENST00000424544 A0A087WWV3 80 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 ALDH2P05091 517 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 SRGAP2BP0DMP2 458 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 CAPSQ13938 189 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 TRIM29Q14134 588 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 GIT2Q14161 759 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 HFE2Q6ZVN8 426 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 PIGOQ8TEQ8 1089 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
DDR1-234ENST00000424544 POLR3CQ9BUI4 534 aaPredicted RBP17.97■□□□□ 0.47
DDR1-234ENST00000424544 EIF2AQ9BY44 585 aaKnown RBP17.97■□□□□ 0.47
DDR1-234ENST00000424544 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
DDR1-234ENST00000424544 MIOSQ9NXC5 875 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 SMC3Q9UQE7 1217 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 INPP5FQ9Y2H2 1132 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 IPPQ9Y573 584 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 ARID2Q68CP9 1835 aa17.97■□□□□ 0.47
DDR1-234ENST00000424544 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 POTEMA6NI47 508 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
DDR1-234ENST00000424544 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
DDR1-234ENST00000424544 ZXDAP98168 799 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 ITIH3Q06033 890 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 ORC2Q13416 577 aaPredicted RBP17.96■□□□□ 0.47
DDR1-234ENST00000424544 LLGL2Q6P1M3 1020 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 C4orf32Q8N8J7 132 aa17.96■□□□□ 0.47
DDR1-234ENST00000424544 SPRYD3Q8NCJ5 442 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms