RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SMARCA5O60264 1052 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 EPN2O95208 641 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ALDH2P05091 517 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 SLC11A1P49279 550 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 GLUD2P49448 558 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 NTHL1P78549 312 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 FGD1P98174 961 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 CREB5Q02930 508 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 LRRC32Q14392 662 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 DSC3Q14574 896 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 TSHZ3Q63HK5 1081 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 TWF2Q6IBS0 349 aaKnown RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 KIAA0319LQ8IZA0 1049 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 DEFB124Q8NES8 71 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 PIBF1Q8WXW3 757 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ING5Q8WYH8 240 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 FGF13Q92913 245 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 LPPQ93052 612 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF707Q96C28 371 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 LOXL4Q96JB6 756 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF668Q96K58 619 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 RPS6KC1Q96S38 1066 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 MAP7D2Q96T17 732 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 HNRNPABQ99729 332 aaKnown RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 SDF4Q9BRK5 362 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 LRRCC1Q9C099 1032 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 TBC1D13Q9NVG8 400 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 DNAJB4Q9UDY4 337 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ANAPC4Q9UJX5 808 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 PRG3Q9Y2Y8 225 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-203ENST00000424270 LAMA4Q16363 1823 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-203ENST00000424270 A0A0U1RQF3 1178 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 KLRF2D3W0D1 207 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 ATP9AO75110 1047 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 XYLBO75191 536 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 SOD2P04179 222 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 KCNA2P16389 499 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 NLRP11P59045 1033 aaKnown RBP7.2□□□□□ -1.26
SDCBP-203ENST00000424270 SIM1P81133 766 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-203ENST00000424270 GRM2Q14416 872 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 CCDC178Q5BJE1 867 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 PPM1LQ5SGD2 360 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 VPS53Q5VIR6 699 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 FAM160B1Q5W0V3 765 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 KBTBD6Q86V97 674 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 SPEM1Q8N4L4 309 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 HDAC7Q8WUI4 952 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 GPRASP2Q96D09 838 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 VN1R3Q9BXE9 311 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 RHOBTB2Q9BYZ6 727 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-203ENST00000424270 CCDC86Q9H6F5 360 aaKnown RBP7.2□□□□□ -1.26
SDCBP-203ENST00000424270 TMEM9BQ9NQ34 198 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 SLC9A2Q9UBY0 812 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 TCEAL9Q9UHQ7 104 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 WASF3Q9UPY6 502 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 PCDHGA5Q9Y5G8 931 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 PIAS3Q9Y6X2 628 aa7.2□□□□□ -1.26
SDCBP-203ENST00000424270 RALGAPA1Q6GYQ0 2036 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 CCL16O15467 120 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 TGM5O43548 720 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 HBP1O60381 514 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 PPP1R11O60927 126 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-203ENST00000424270 NR1I2O75469 434 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 SKIP12755 728 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 PLA2G2AP14555 144 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 CSRP1P21291 193 aaKnown RBP7.19□□□□□ -1.26
SDCBP-203ENST00000424270 FGFR4P22455 802 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 TMOD1P28289 359 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 KIF5BP33176 963 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 OR1G1P47890 313 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 PXNP49023 591 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-203ENST00000424270 GHRHRQ02643 423 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 SCAPQ12770 1279 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 ELF2Q15723 593 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 PLPPR4Q7Z2D5 763 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 GAB3Q8WWW8 586 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 RSPH1Q8WYR4 309 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 DNASE1L2Q92874 299 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 MCRS1Q96EZ8 462 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 PIGSQ96S52 555 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 DOCK5Q9H7D0 1870 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
SDCBP-203ENST00000424270 NBEAQ8NFP9 2946 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 SPAARA0A1B0GVQ0 90 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 J3QKU1 62 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 DDX39AO00148 427 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 KHNYNO15037 678 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ECI2O75521 394 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ZMYND10O75800 440 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CAVIN2O95810 425 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 POMCP01189 267 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 EIF4BP23588 611 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CCNE1P24864 410 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms