RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 MMS19Q96T76 1030 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 RHOXF2Q9BQY4 288 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 HSPBP1Q9NZL4 362 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 RBPJLQ9UBG7 517 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 SYNGAP1Q96PV0 1343 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 P4HA2O15460 535 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 PJA2O43164 708 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 PEX10O60683 326 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 SLC18A3Q16572 532 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 CAPZA3Q96KX2 299 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 ARFGAP3Q9NP61 516 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 SALL4Q9UJQ4 1053 aa17.98■□□□□ 0.47
CMTM3-202ENST00000424011 DENND3A2RUS2 1198 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 TACC1O75410 805 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-202ENST00000424011 OATP04181 439 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
CMTM3-202ENST00000424011 RFX1P22670 979 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 VAMP7P51809 220 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 MYL7Q01449 175 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 C10orf76Q5T2E6 689 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 GPATCH11Q8N954 259 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 SIX2Q9NPC8 291 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 RAB21Q9UL25 225 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 MYH11P35749 1972 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 IGKV6D-21A0A0A0MT36 114 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 CCDC151A5D8V7 595 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 ZNF185O15231 689 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 RPS6KA5O75582 802 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 CCDC172P0C7W6 258 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 POLGP54098 1239 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-202ENST00000424011 ARID5AQ03989 594 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 FSTL1Q12841 308 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 BRD3Q15059 726 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 FAM160B1Q5W0V3 765 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 SUGP1Q8IWZ8 645 aaKnown RBP17.97■□□□□ 0.47
CMTM3-202ENST00000424011 ANKRD13CQ8N6S4 541 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 PPM1EQ8WY54 764 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 ALS2CR12Q96Q35 445 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 MMP19Q99542 508 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 CBWD1Q9BRT8 395 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 PCIF1Q9H4Z3 704 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 CEP83Q9Y592 693 aa17.97■□□□□ 0.47
CMTM3-202ENST00000424011 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
CMTM3-202ENST00000424011 PRKCIP41743 596 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 CST9Q5W186 159 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 VPS36Q86VN1 386 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 SHCBP1Q8NEM2 672 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
CMTM3-202ENST00000424011 SORBS3O60504 671 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 STAT1P42224 750 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 JAM2P57087 298 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 METTL7BQ6UX53 244 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 IRF2BP2Q7Z5L9 587 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 USP37Q86T82 979 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 RNF10Q8N5U6 811 aaKnown RBP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 FUT8Q9BYC5 575 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 NIFKQ9BYG3 293 aaKnown RBP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 STK33Q9BYT3 514 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 PPME1Q9Y570 386 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 LCTP09848 1927 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 TRIM49P0CI25 452 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 TRIM49CP0CI26 452 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 FERP16591 822 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CNGA1P29973 690 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 ENOX2Q16206 610 aaKnown RBP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CBWD6Q4V339 395 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CBWD3Q5JTY5 395 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CBWD5Q5RIA9 395 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 SWT1Q5T5J6 900 aaKnown RBP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 CCDC91Q7Z6B0 441 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 SLC7A3Q8WY07 619 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 SEPT1Q8WYJ6 367 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 POLR3FQ9H1D9 316 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-202ENST00000424011 XPNPEP1Q9NQW7 623 aa17.95■□□□□ 0.46
CMTM3-202ENST00000424011 DNAJC25-GNG10A0A024R161 153 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 PMM2O15305 246 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 RFC5P40937 340 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 GTF2A2P52657 109 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 MCCD1P59942 119 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-202ENST00000424011 EMC2Q15006 297 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 LONRF2Q1L5Z9 754 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-202ENST00000424011 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 AFAP1L1Q8TED9 768 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 INTS2Q9H0H0 1204 aaKnown RBP17.94■□□□□ 0.46
CMTM3-202ENST00000424011 APEX2Q9UBZ4 518 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 TELO2Q9Y4R8 837 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 KIAA1217Q5T5P2 1943 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 PDE2AO00408 941 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-202ENST00000424011 CETPP11597 493 aa17.94■□□□□ 0.46
CMTM3-202ENST00000424011 VSNL1P62760 191 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms