RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
HDAC6-205ENST00000423941 TMEM161BQ8NDZ6 487 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 DDX12PQ92771 950 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 CCDC51Q96ER9 411 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 ZBED2Q9BTP6 218 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 KIFC3Q9BVG8 833 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 NKX2-4Q9H2Z4 354 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 GDPD2Q9HCC8 539 aa20.37■□□□□ 0.85
HDAC6-205ENST00000423941 CNTNAP2Q9UHC6 1331 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 FRMD3A2A2Y4 597 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 TTLL13PA6NNM8 815 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 B4GALT5O43286 388 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 CA3P07451 260 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 LINC00271P0C7V0 271 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 SKIP12755 728 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 NCKAP1LP55160 1127 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 TAP1Q03518 808 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 PYM1Q9BRP8 204 aaKnown RBP20.36■□□□□ 0.85
HDAC6-205ENST00000423941 SEMA6BQ9H3T3 888 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 MAGEF1Q9HAY2 307 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 KMT5AQ9NQR1 393 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 FAM105AQ9NUU6 356 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 PCDHB7Q9Y5E2 793 aa20.36■□□□□ 0.85
HDAC6-205ENST00000423941 PHLPP2Q6ZVD8 1323 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 K7ERI5 159 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 PRKCBP05771 671 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 PFKFB1P16118 471 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 SCP2P22307 547 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 RAB27AP51159 221 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 CACNB1Q02641 598 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-205ENST00000423941 NCBP1Q09161 790 aaKnown RBP20.35■□□□□ 0.85
HDAC6-205ENST00000423941 TWF2Q6IBS0 349 aaKnown RBP20.35■□□□□ 0.85
HDAC6-205ENST00000423941 FAM117BQ6P1L5 589 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 NOTUMQ6P988 496 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 DHX58Q96C10 678 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
HDAC6-205ENST00000423941 ST6GALNAC4Q9H4F1 302 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 ZNF576Q9H609 170 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 SLC28A3Q9HAS3 691 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 PARVGQ9HBI0 331 aa20.35■□□□□ 0.85
HDAC6-205ENST00000423941 A0A1B0GVL5 298 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 LINC01553A4QN01 128 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 CCDC169A6NNP5 214 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 SLC16A4O15374 487 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 SLFN14P0C7P3 912 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 MAPTP10636 758 aaKnown RBP20.34■□□□□ 0.85
HDAC6-205ENST00000423941 SMTNP53814 917 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 NT5DC1Q5TFE4 455 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 DYMQ7RTS9 669 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 CMTR2Q8IYT2 770 aaKnown RBP20.34■□□□□ 0.85
HDAC6-205ENST00000423941 CPB2Q96IY4 423 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 YME1L1Q96TA2 773 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 STRA6Q9BX79 667 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 TRIM9Q9C026 710 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 USP25Q9UHP3 1055 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 PCDHB2Q9Y5E7 798 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 RALGAPA2Q2PPJ7 1873 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 NLRC5Q86WI3 1866 aa20.34■□□□□ 0.85
HDAC6-205ENST00000423941 TRANK1O15050 2925 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 ACTN4O43707 911 aaKnown RBP20.33■□□□□ 0.85
HDAC6-205ENST00000423941 TRAK2O60296 914 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 FAM13AO94988 1023 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 ERVK-21P61565 698 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 PRPF4BQ13523 1007 aaKnown RBP20.33■□□□□ 0.85
HDAC6-205ENST00000423941 ZNF697Q5TEC3 545 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 HAUS6Q7Z4H7 955 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 SMG8Q8ND04 991 aaKnown RBP20.33■□□□□ 0.85
HDAC6-205ENST00000423941 CNNM3Q8NE01 707 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 CLP1Q92989 425 aaKnown RBP20.33■□□□□ 0.85
HDAC6-205ENST00000423941 C7orf25Q9BPX7 421 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 LRRC27Q9C0I9 530 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 PTPRHQ9HD43 1115 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 SEL1LQ9UBV2 794 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 LRFN2Q9ULH4 789 aa20.33■□□□□ 0.85
HDAC6-205ENST00000423941 H0YCG3 227 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 KRT18P05783 430 aaKnown RBP20.32■□□□□ 0.84
HDAC6-205ENST00000423941 NDUFA8P51970 172 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 GTF2BQ00403 316 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 AMPD3Q01432 767 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 LONRF3Q496Y0 759 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 CLLU1OSQ5K130 101 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 SLC27A1Q6PCB7 646 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 AGMOQ6ZNB7 445 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 MYCT1Q8N699 235 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 RSPH1Q8WYR4 309 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 STAMQ92783 540 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 CASD1Q96PB1 797 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 ACO2Q99798 780 aaKnown RBP20.32■□□□□ 0.84
HDAC6-205ENST00000423941 EIF2AQ9BY44 585 aaKnown RBP20.32■□□□□ 0.84
HDAC6-205ENST00000423941 GOLPH3LQ9H4A5 285 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 PDZD7Q9H5P4 517 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 OLFML3Q9NRN5 406 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 MTMR10Q9NXD2 777 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 TNFSF13BQ9Y275 285 aa20.32■□□□□ 0.84
HDAC6-205ENST00000423941 ABLIM1O14639 778 aa20.31■□□□□ 0.84
HDAC6-205ENST00000423941 N4BP3O15049 544 aa20.31■□□□□ 0.84
HDAC6-205ENST00000423941 INPPL1O15357 1258 aa20.31■□□□□ 0.84
HDAC6-205ENST00000423941 HOXA2O43364 376 aa20.31■□□□□ 0.84
HDAC6-205ENST00000423941 PPP1R37O75864 691 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms