RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 NFKBIZQ9BYH8 718 aa18.67■□□□□ 0.58
CCDC78-203ENST00000423653 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
CCDC78-203ENST00000423653 UBN1Q9NPG3 1134 aa18.67■□□□□ 0.58
CCDC78-203ENST00000423653 KANSL3Q9P2N6 904 aa18.67■□□□□ 0.58
CCDC78-203ENST00000423653 MEIS3P2A8K0S8 358 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 INO80B-WBP1J3KQ70 363 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 OFD1O75665 1012 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 HOXA11P31270 313 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 TECP42680 631 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 GIT2Q14161 759 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 ANKRD54Q6NXT1 300 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 MRPL10Q7Z7H8 261 aaKnown RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 IFNLR1Q8IU57 520 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 HACE1Q8IYU2 909 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 TMEM87AQ8NBN3 555 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 FAM193BQ96PV7 902 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 PHF7Q9BWX1 381 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 TMEM60Q9H2L4 133 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 NRDE2Q9H7Z3 1164 aa18.66■□□□□ 0.58
CCDC78-203ENST00000423653 NOL7Q9UMY1 257 aaKnown RBP18.66■□□□□ 0.58
CCDC78-203ENST00000423653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 NT5C1B-RDH14C9J2C7 533 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 TSPAN1O60635 241 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 NCLP19338 710 aaKnown RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 TRAPPC10P48553 1259 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 RBM10P98175 930 aaKnown RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 CAPSQ13938 189 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 KCNC3Q14003 757 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 C8orf34Q49A92 452 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 HAUS3Q68CZ6 603 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 LLGL2Q6P1M3 1020 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 AGMOQ6ZNB7 445 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 DDX53Q86TM3 631 aaKnown RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 NOSTRINQ8IVI9 506 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 VPS52Q8N1B4 723 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 MRPL43Q8N983 215 aaKnown RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 MCPH1Q8NEM0 835 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 FBXO18Q8NFZ0 1043 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 PIGOQ8TEQ8 1089 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 TRIM6Q9C030 488 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 ZBP1Q9H171 429 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 POLR3FQ9H1D9 316 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-203ENST00000423653 RAPGEFL1Q9UHV5 662 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
CCDC78-203ENST00000423653 C5orf42Q9H799 3197 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 GALTP07902 379 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 ARL2P36404 184 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 MBTD1Q05BQ5 628 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-203ENST00000423653 HERC4Q5GLZ8 1057 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-203ENST00000423653 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 UBXN11Q5T124 520 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 RNF135Q8IUD6 432 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 ASAP3Q8TDY4 903 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 SUSD6Q92537 303 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 TMEM175Q9BSA9 504 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 POLR3CQ9BUI4 534 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-203ENST00000423653 CSRNP2Q9H175 543 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 DBR1Q9UK59 544 aaKnown RBP18.64■□□□□ 0.57
CCDC78-203ENST00000423653 ARIH1Q9Y4X5 557 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-203ENST00000423653 HCFC2Q9Y5Z7 792 aa18.64■□□□□ 0.57
CCDC78-203ENST00000423653 LOC730098B7Z3J9 87 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 CTSAP10619 480 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 ITGA4P13612 1032 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 GLRA2P23416 452 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 TMEM173Q86WV6 379 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-203ENST00000423653 NACC1Q96RE7 527 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 DZANK1Q9NVP4 752 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 MUTYHQ9UIF7 546 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 IPPQ9Y573 584 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 IRAK3Q9Y616 596 aa18.63■□□□□ 0.57
CCDC78-203ENST00000423653 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 ST18O60284 1047 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 CXCL14O95715 111 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 SPATA31C1P0DKV0 1188 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 MUTP22033 750 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 RPA1P27694 616 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 SLC11A1P49279 550 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 ZNF174Q15697 407 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 CATSPER3Q86XQ3 398 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 ZBTB8OSQ8IWT0 167 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 KIF2CQ99661 725 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 ZMYM2Q9UBW7 1377 aa18.62■□□□□ 0.57
CCDC78-203ENST00000423653 ARHGEF35A5YM69 484 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 INPPL1O15357 1258 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 CLASP2O75122 1294 aaKnown RBP18.61■□□□□ 0.57
CCDC78-203ENST00000423653 MED24O75448 989 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 PLA2G5P39877 138 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 ITIH3Q06033 890 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 RABEP1Q15276 862 aa18.61■□□□□ 0.57
CCDC78-203ENST00000423653 SLC27A1Q6PCB7 646 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms