RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 HELQQ8TDG4 1101 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 P2RX5Q93086 422 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 CASD1Q96PB1 797 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 PLIN2Q99541 437 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 TYW1Q9NV66 732 aaKnown RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
USP49-204ENST00000423567 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 CLIC4Q9Y696 253 aa12.1□□□□□ -0.47
USP49-204ENST00000423567 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 MARCKSP29966 332 aaPredicted RBP12.09□□□□□ -0.47
USP49-204ENST00000423567 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
USP49-204ENST00000423567 EFNA5P52803 228 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 DMP1Q13316 513 aaPredicted RBP12.09□□□□□ -0.47
USP49-204ENST00000423567 MAPK6Q16659 721 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CDCA2Q69YH5 1023 aaPredicted RBP12.09□□□□□ -0.47
USP49-204ENST00000423567 FAM173BQ6P4H8 233 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 PNMA5Q96PV4 448 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 THEGQ9P2T0 379 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CCDC39Q9UFE4 941 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CHD9Q3L8U1 2897 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 PHLPP2Q6ZVD8 1323 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CNTNAP2Q9UHC6 1331 aa12.09□□□□□ -0.47
USP49-204ENST00000423567 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 HIP1RO75146 1068 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PRKCBP05771 671 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 ITGA4P13612 1032 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 LIG1P18858 919 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PPM1AP35813 382 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 STK38Q15208 465 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PTPAQ15257 358 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 RINT1Q6NUQ1 792 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 KLHL23Q8NBE8 558 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 BSNDQ8WZ55 320 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 LPPQ93052 612 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 RUSC1Q9BVN2 902 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 NSUN3Q9H649 340 aaKnown RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 RSAD1Q9HA92 442 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 C17orf75Q9HAS0 396 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
USP49-204ENST00000423567 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 PLAGL2Q9UPG8 496 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 ARID2Q68CP9 1835 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 MYO9BQ13459 2157 aa12.08□□□□□ -0.48
USP49-204ENST00000423567 N4BP3O15049 544 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 SNPHO15079 494 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 GRM6O15303 877 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 ITGB1P05556 798 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 KRT18P05783 430 aaKnown RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 ARF4P18085 180 aaPredicted RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 GUCY2CP25092 1073 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 ALDH7A1P49419 539 aaKnown RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 SMTNP53814 917 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 PEX3P56589 373 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 UBE3AQ05086 875 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 BECN1Q14457 450 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 SLC39A14Q15043 492 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 AMHR2Q16671 573 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 FAM187BQ17R55 369 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 C1orf186Q6ZWK4 172 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
USP49-204ENST00000423567 APBB1IPQ7Z5R6 666 aaPredicted RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 MRPL10Q7Z7H8 261 aaKnown RBP12.07□□□□□ -0.48
USP49-204ENST00000423567 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms