RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 ACKR2O00590 384 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 PQBP1O60828 265 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 DARSP14868 501 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 EIF4BP23588 611 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 PMS1P54277 932 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 IQCB1Q15051 598 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 TPD52L1Q16890 204 aaPredicted RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 FAM187BQ17R55 369 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 TRIM71Q2Q1W2 868 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 ZCWPW2Q504Y3 356 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 SPATA1Q5VX52 437 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 TTI2Q6NXR4 508 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 MRPL4Q9BYD3 311 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 MINDY3Q9H8M7 445 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 CDY2AQ9Y6F7 541 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 ZMYM2Q9UBW7 1377 aa17.5■□□□□ 0.39
ABCA1-203ENST00000423487 KIAA0100Q14667 2235 aaKnown RBP17.5■□□□□ 0.39
ABCA1-203ENST00000423487 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 HNRNPDLO14979 420 aaKnown RBP17.49■□□□□ 0.39
ABCA1-203ENST00000423487 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 PIGRP01833 764 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 LIG4P49917 911 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 BFSP2Q13515 415 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 EDRF1Q3B7T1 1238 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 ZPBP2Q6X784 338 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 LUZP1Q86V48 1076 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
ABCA1-203ENST00000423487 MED15Q96RN5 788 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
ABCA1-203ENST00000423487 ERLIN2O94905 339 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 FGFR1OPO95684 399 aaKnown RBP17.48■□□□□ 0.39
ABCA1-203ENST00000423487 CTSHP09668 335 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
ABCA1-203ENST00000423487 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.39
ABCA1-203ENST00000423487 TPM4P67936 248 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 FKBP3Q00688 224 aaKnown RBP17.48■□□□□ 0.39
ABCA1-203ENST00000423487 TLE2Q04725 743 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 RBL2Q08999 1139 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 MGAT3Q09327 533 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 PRPF4BQ13523 1007 aaKnown RBP17.48■□□□□ 0.39
ABCA1-203ENST00000423487 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 CSGALNACT2Q8N6G5 542 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 NFE2L3Q9Y4A8 694 aa17.48■□□□□ 0.39
ABCA1-203ENST00000423487 CSDE1O75534 798 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 CHRNA1P02708 482 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 CKBP12277 381 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 RPL13P26373 211 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 NCBP1Q09161 790 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 NCAPHQ15003 741 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 NFIL3Q16649 462 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 TMEM132AQ24JP5 1023 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 CATSPER4Q7RTX7 472 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 DUSP9Q99956 384 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 TARS2Q9BW92 718 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 ATP11BQ9Y2G3 1177 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 NR3C1P04150 777 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 IQCF3P0C7M6 154 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 ADAM9Q13443 819 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 MYBPC2Q14324 1141 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 AMHR2Q16671 573 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 ZNF618Q5T7W0 954 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 SLFN12LQ6IEE8 588 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 TMEM40Q8WWA1 233 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
ABCA1-203ENST00000423487 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 SQORQ9Y6N5 450 aa17.47■□□□□ 0.39
ABCA1-203ENST00000423487 CNTNAP2Q9UHC6 1331 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 ANKRD63C9JTQ0 380 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 CETN3O15182 167 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 CLIC2O15247 247 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 TSPAN1O60635 241 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 RPS6KA5O75582 802 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 TOM1L1O75674 476 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 EDN1P05305 212 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 GARTP22102 1010 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 NR2F2P24468 414 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 GSE1Q14687 1217 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 ATF7IP2Q5U623 682 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 TSHZ1Q6ZSZ6 1077 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 UBE2Q1Q7Z7E8 422 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 TMEM174Q8WUU8 243 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 CEP63Q96MT8 703 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.39
ABCA1-203ENST00000423487 THAP9Q9H5L6 903 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 FANCLQ9NW38 375 aa17.46■□□□□ 0.39
ABCA1-203ENST00000423487 TNFSF13BQ9Y275 285 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms