RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TRAK2O60296 914 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 TSPAN1O60635 241 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 BAIAP3O94812 1187 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 ERLIN2O94905 339 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 ZSCAN20P17040 1043 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-202ENST00000422544 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-202ENST00000422544 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-202ENST00000422544 EFNA5P52803 228 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 SMTNP53814 917 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 ASIC1P78348 528 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 MAPK6Q16659 721 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 AMHR2Q16671 573 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 HERC4Q5GLZ8 1057 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-202ENST00000422544 RASIP1Q5U651 963 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 SFR1Q86XK3 245 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 TMEM161BQ8NDZ6 487 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 LINC01599Q8WXQ3 324 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 CDX2Q99626 313 aaPredicted RBP10.22□□□□□ -0.77
PDGFC-202ENST00000422544 ADAM2Q99965 735 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 FTHL17Q9BXU8 183 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 CCDC113Q9H0I3 377 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 FZD8Q9H461 694 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 LMBRD1Q9NUN5 540 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 TBC1D7Q9P0N9 293 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 ARHGAP28Q9P2N2 729 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 TET1Q8NFU7 2136 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 SCN5AQ14524 2016 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 FRMD3A2A2Y4 597 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 DENND3A2RUS2 1198 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 ACKR2O00590 384 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 EFCAB14O75071 495 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 PRKCBP05771 671 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 MAPTP10636 758 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 GAP43P17677 238 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 NMT1P30419 496 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 KCNJ6P48051 423 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 WDR5P61964 334 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 DEFB103AP81534 67 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 DSC3Q14574 896 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 TAS1R3Q7RTX0 852 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 HAUS6Q7Z4H7 955 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 TMCO2Q7Z6W1 182 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 FAM178BQ8IXR5 827 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 CCDC65Q8IXS2 484 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 HPS3Q969F9 1004 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 CPB2Q96IY4 423 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 FIZ1Q96SL8 496 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 MTIF3Q9H2K0 278 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 TMEM134Q9H6X4 195 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 MRPL44Q9H9J2 332 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 CHST12Q9NRB3 414 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 RGS18Q9NS28 235 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 AGPAT5Q9NUQ2 364 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 PIN4Q9Y237 131 aaKnown RBP10.21□□□□□ -0.77
PDGFC-202ENST00000422544 SLC4A7Q9Y6M7 1214 aa10.21□□□□□ -0.77
PDGFC-202ENST00000422544 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 GRXCR1A8MXD5 290 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 K7ENM7 598 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 KINO60870 393 aaKnown RBP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 UPP2O95045 317 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 AMHP03971 560 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 EDN1P05305 212 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 ARF4P18085 180 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 NCKAP1LP55160 1127 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 STRN3Q13033 797 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 COASYQ13057 564 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 PCBP1Q15365 356 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 FAM187BQ17R55 369 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 TMEM132AQ24JP5 1023 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 ZC2HC1CQ53FD0 456 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 NT5DC1Q5TFE4 455 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 TWF2Q6IBS0 349 aaKnown RBP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 KANK3Q6NY19 840 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 FAM117BQ6P1L5 589 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 SLC24A5Q71RS6 500 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 ZNF720Q7Z2F6 126 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 CDR2LQ86X02 465 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-202ENST00000422544 MYOCDQ8IZQ8 938 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 PIEZO1Q92508 2521 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 TIGD1Q96MW7 591 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 FGFBP2Q9BYJ0 223 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 SEMA6BQ9H3T3 888 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 C1orf112Q9NSG2 853 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 DACT1Q9NYF0 836 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 SEL1LQ9UBV2 794 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
PDGFC-202ENST00000422544 ARID2Q68CP9 1835 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 PHLPP2Q6ZVD8 1323 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 A0A1B0GUA9 196 aa10.19□□□□□ -0.78
PDGFC-202ENST00000422544 C9IYK1 514 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms