RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ATRNL1Q5VV63 1379 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 TCRBV7S2A1N4TA0A589 114 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 TLDC2A0PJX2 215 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 GOLGA8IPA6NC78 632 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 GOLGA8JA6NMD2 632 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 GTF2A1P52655 376 aaPredicted RBP17.05■□□□□ 0.32
CDH1-202ENST00000422392 PCDHB18PQ96TA0 734 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 PSMD1Q99460 953 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 STRA6Q9BX79 667 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 ATXN2Q99700 1313 aaKnown RBP17.05■□□□□ 0.32
CDH1-202ENST00000422392 SGPL1O95470 568 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 CCDC172P0C7W6 258 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 ITGB5P18084 799 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 CHRNA5P30532 468 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 C1orf220Q5T0J3 134 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 TTC27Q6P3X3 843 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 C6orf89Q6UWU4 347 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 SPATS2Q86XZ4 545 aaKnown RBP17.05■□□□□ 0.32
CDH1-202ENST00000422392 CNPY4Q8N129 248 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
CDH1-202ENST00000422392 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 UBE4BO95155 1302 aa17.05■□□□□ 0.32
CDH1-202ENST00000422392 ENTPD3O75355 529 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 FSBPO95073 299 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 BCRP11274 1271 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 COMTP21964 271 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 VAMP7P51809 220 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 PRELID2Q8N945 189 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 RNF25Q96BH1 459 aaPredicted RBP17.04■□□□□ 0.32
CDH1-202ENST00000422392 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
CDH1-202ENST00000422392 ATP2C2O75185 946 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
CDH1-202ENST00000422392 RPL21P46778 160 aaKnown RBP17.04■□□□□ 0.32
CDH1-202ENST00000422392 PMS2P54278 862 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 LDHDQ86WU2 507 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 RANBP17Q9H2T7 1088 aaKnown RBP17.04■□□□□ 0.32
CDH1-202ENST00000422392 GPRC5CQ9NQ84 441 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 PTPN22Q9Y2R2 807 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 BRWD3Q6RI45 1802 aa17.04■□□□□ 0.32
CDH1-202ENST00000422392 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 KCTD17Q8N5Z5 321 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 CYP26A1O43174 497 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 PTGIRP43119 386 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 KCNJ1P48048 391 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 SLC29A2Q14542 456 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 YTHDF3Q7Z739 585 aaKnown RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 SLC9A9Q8IVB4 645 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 RHOT2Q8IXI1 618 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 SEC16BQ96JE7 1060 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 OSBPL7Q9BZF2 842 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 SEMA4AQ9H3S1 761 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 GRHL1Q9NZI5 618 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 HSPBP1Q9NZL4 362 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
CDH1-202ENST00000422392 ZHX2Q9Y6X8 837 aa17.03■□□□□ 0.32
CDH1-202ENST00000422392 PHF2O75151 1096 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 PYGMP11217 842 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 FGFR4P22455 802 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 MAP2K1Q02750 393 aaPredicted RBP17.02■□□□□ 0.32
CDH1-202ENST00000422392 EPC2Q52LR7 807 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 NSMFQ6X4W1 530 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 INTS8Q75QN2 995 aaKnown RBP17.02■□□□□ 0.32
CDH1-202ENST00000422392 TLCD1Q96CP7 247 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 CABS1Q96KC9 395 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 ZSWIM1Q9BR11 485 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 MXRA8Q9BRK3 442 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 KCND2Q9NZV8 630 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 TRPC5Q9UL62 973 aaPredicted RBP17.02■□□□□ 0.32
CDH1-202ENST00000422392 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
CDH1-202ENST00000422392 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 SYNGAP1Q96PV0 1343 aa17.02■□□□□ 0.32
CDH1-202ENST00000422392 CALCAP01258 141 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 CHRNB2P17787 502 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 MNAT1P51948 309 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 FKBP1AP62942 108 aaKnown RBP17.02■□□□□ 0.31
CDH1-202ENST00000422392 GPC5P78333 572 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 CCDC137Q6PK04 289 aaKnown RBP17.02■□□□□ 0.31
CDH1-202ENST00000422392 SUGP1Q8IWZ8 645 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms