RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 POP1Q99575 1024 aaKnown RBP28.36■■■□□ 2.13
SMDT1-202ENST00000422252 POLR3CQ9BUI4 534 aaPredicted RBP28.36■■■□□ 2.13
SMDT1-202ENST00000422252 NRDE2Q9H7Z3 1164 aa28.36■■■□□ 2.13
SMDT1-202ENST00000422252 INO80B-WBP1J3KQ70 363 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 TSPAN1O60635 241 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 USO1O60763 962 aaKnown RBP28.35■■■□□ 2.13
SMDT1-202ENST00000422252 MED24O75448 989 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 AXLP30530 894 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 RBM10P98175 930 aaKnown RBP28.35■■■□□ 2.13
SMDT1-202ENST00000422252 SMC1AQ14683 1233 aaKnown RBP28.35■■■□□ 2.13
SMDT1-202ENST00000422252 ERMNQ8TAM6 284 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 URGCPQ8TCY9 931 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 RSAD1Q9HA92 442 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 NOL7Q9UMY1 257 aaKnown RBP28.35■■■□□ 2.13
SMDT1-202ENST00000422252 CNTNAP2Q9UHC6 1331 aa28.35■■■□□ 2.13
SMDT1-202ENST00000422252 SRGAP2BP0DMP2 458 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 NCLP19338 710 aaKnown RBP28.34■■■□□ 2.13
SMDT1-202ENST00000422252 GLRA2P23416 452 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 NCBP1Q09161 790 aaKnown RBP28.34■■■□□ 2.13
SMDT1-202ENST00000422252 TMEM31Q5JXX7 168 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 NOTUMQ6P988 496 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 TMEM184AQ6ZMB5 413 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 CNNM3Q8NE01 707 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 NACC1Q96RE7 527 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 NFKBIZQ9BYH8 718 aa28.34■■■□□ 2.13
SMDT1-202ENST00000422252 POLR3FQ9H1D9 316 aaPredicted RBP28.34■■■□□ 2.13
SMDT1-202ENST00000422252 DBR1Q9UK59 544 aaKnown RBP28.34■■■□□ 2.13
SMDT1-202ENST00000422252 ST18O60284 1047 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 GALTP07902 379 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 ALADP13716 330 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 U2AF2P26368 475 aaKnown RBP eCLIP28.33■■■□□ 2.13
SMDT1-202ENST00000422252 MBTD1Q05BQ5 628 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 KCNC3Q14003 757 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 TMEM173Q86WV6 379 aaPredicted RBP28.33■■■□□ 2.13
SMDT1-202ENST00000422252 MRPL43Q8N983 215 aaKnown RBP28.33■■■□□ 2.13
SMDT1-202ENST00000422252 CCDC51Q96ER9 411 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 LRFN3Q9BTN0 628 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 GBP3Q9H0R5 595 aa28.33■■■□□ 2.13
SMDT1-202ENST00000422252 GPR37L1O60883 481 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 RPA1P27694 616 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 BMS1Q14692 1282 aaKnown RBP28.32■■■□□ 2.12
SMDT1-202ENST00000422252 SMG8Q8ND04 991 aaKnown RBP28.32■■■□□ 2.12
SMDT1-202ENST00000422252 IGSF21Q96ID5 467 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 CPB2Q96IY4 423 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 C11orf16Q9NQ32 467 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 KANSL3Q9P2N6 904 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 DNAJB4Q9UDY4 337 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 USP15Q9Y4E8 981 aaPredicted RBP28.32■■■□□ 2.12
SMDT1-202ENST00000422252 IPPQ9Y573 584 aa28.32■■■□□ 2.12
SMDT1-202ENST00000422252 C5orf42Q9H799 3197 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 C2orf71A6NGG8 1288 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 AMHR2Q16671 573 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 POTEGQ6S5H5 508 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 MAEAQ7L5Y9 396 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 DDX53Q86TM3 631 aaKnown RBP28.31■■■□□ 2.12
SMDT1-202ENST00000422252 ZNF280BQ86YH2 543 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 VPS52Q8N1B4 723 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 C4orf32Q8N8J7 132 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 MCPH1Q8NEM0 835 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 EIF2AQ9BY44 585 aaKnown RBP28.31■■■□□ 2.12
SMDT1-202ENST00000422252 CSRNP2Q9H175 543 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 UBN1Q9NPG3 1134 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 GPRC5CQ9NQ84 441 aa28.31■■■□□ 2.12
SMDT1-202ENST00000422252 ITGA4P13612 1032 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 SLC11A1P49279 550 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 AFF1P51825 1210 aaKnown RBP28.3■■■□□ 2.12
SMDT1-202ENST00000422252 NBR1Q14596 966 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 HAUS3Q68CZ6 603 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 ANKRD54Q6NXT1 300 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 LLGL2Q6P1M3 1020 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 ZBP1Q9H171 429 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 KIF3AQ9Y496 699 aa28.3■■■□□ 2.12
SMDT1-202ENST00000422252 FAM86C2PA6NEL3 165 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 DCXO43602 365 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 B4GALT3O60512 393 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 DDHD2O94830 711 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 ARF4P18085 180 aaPredicted RBP28.29■■■□□ 2.12
SMDT1-202ENST00000422252 MUTP22033 750 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 CA8P35219 290 aa28.29■■■□□ 2.12
SMDT1-202ENST00000422252 FXR2P51116 673 aaKnown RBP eCLIP28.29■■■□□ 2.12
SMDT1-202ENST00000422252 BCL7CQ8WUZ0 217 aaPredicted RBP28.29■■■□□ 2.12
SMDT1-202ENST00000422252 FAM193BQ96PV7 902 aaPredicted RBP28.29■■■□□ 2.12
SMDT1-202ENST00000422252 UPF2Q9HAU5 1272 aaKnown RBP28.29■■■□□ 2.12
SMDT1-202ENST00000422252 LRRIQ4A6NIV6 560 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 CXCL14O95715 111 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 POMCP01189 267 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 TOB1P50616 345 aaPredicted RBP28.28■■■□□ 2.12
SMDT1-202ENST00000422252 PADI6Q6TGC4 694 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 TMEM175Q9BSA9 504 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 RAPGEFL1Q9UHV5 662 aa28.28■■■□□ 2.12
SMDT1-202ENST00000422252 ARHGEF35A5YM69 484 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 SUSD6Q92537 303 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 CASP10Q92851 521 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 TRIM6Q9C030 488 aaPredicted RBP28.27■■■□□ 2.12
SMDT1-202ENST00000422252 S1PR5Q9H228 398 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 RNF39Q9H2S5 420 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 LRWD1Q9UFC0 647 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 PCDHB6Q9Y5E3 794 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 IRAK3Q9Y616 596 aa28.27■■■□□ 2.12
SMDT1-202ENST00000422252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms