RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 NRDE2Q9H7Z3 1164 aa19.75■□□□□ 0.75
HDLBP-208ENST00000422080 KANSL3Q9P2N6 904 aa19.75■□□□□ 0.75
HDLBP-208ENST00000422080 DBR1Q9UK59 544 aaKnown RBP19.75■□□□□ 0.75
HDLBP-208ENST00000422080 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
HDLBP-208ENST00000422080 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
HDLBP-208ENST00000422080 CNTNAP2Q9UHC6 1331 aa19.75■□□□□ 0.75
HDLBP-208ENST00000422080 A0A087WWV3 80 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 HIDE1A8MVS5 230 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 GPR37L1O60883 481 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 MED24O75448 989 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 GALTP07902 379 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 SRGAP2BP0DMP2 458 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 ALADP13716 330 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
HDLBP-208ENST00000422080 GLRA2P23416 452 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 U2AF2P26368 475 aaKnown RBP eCLIP19.74■□□□□ 0.752e-9■■■□□ 15.4
HDLBP-208ENST00000422080 RPA1P27694 616 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 CAPSQ13938 189 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 KCNC3Q14003 757 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 SMC1AQ14683 1233 aaKnown RBP19.74■□□□□ 0.75
HDLBP-208ENST00000422080 TMEM31Q5JXX7 168 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 VN1R2Q8NFZ6 395 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 RSAD1Q9HA92 442 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 UBN1Q9NPG3 1134 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 INPP5FQ9Y2H2 1132 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 KIAA1671Q9BY89 1806 aa19.74■□□□□ 0.75
HDLBP-208ENST00000422080 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 INO80B-WBP1J3KQ70 363 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 ST18O60284 1047 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 TSPAN1O60635 241 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 ZC3H11AO75152 810 aaKnown RBP eCLIP19.73■□□□□ 0.75
HDLBP-208ENST00000422080 MUTP22033 750 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
HDLBP-208ENST00000422080 MBTD1Q05BQ5 628 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 C4orf32Q8N8J7 132 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 MCPH1Q8NEM0 835 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 IGSF21Q96ID5 467 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 LRFN3Q9BTN0 628 aa19.73■□□□□ 0.75
HDLBP-208ENST00000422080 POLR3FQ9H1D9 316 aaPredicted RBP19.73■□□□□ 0.75
HDLBP-208ENST00000422080 C2orf71A6NGG8 1288 aa19.72■□□□□ 0.75
HDLBP-208ENST00000422080 USO1O60763 962 aaKnown RBP19.72■□□□□ 0.75
HDLBP-208ENST00000422080 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.752e-7■■□□□ 11.5
HDLBP-208ENST00000422080 AMHR2Q16671 573 aa19.72■□□□□ 0.75
HDLBP-208ENST00000422080 DDX53Q86TM3 631 aaKnown RBP19.72■□□□□ 0.75
HDLBP-208ENST00000422080 SMG8Q8ND04 991 aaKnown RBP19.72■□□□□ 0.75
HDLBP-208ENST00000422080 CSRNP2Q9H175 543 aa19.72■□□□□ 0.75
HDLBP-208ENST00000422080 STK39Q9UEW8 545 aa19.72■□□□□ 0.75
HDLBP-208ENST00000422080 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
HDLBP-208ENST00000422080 CXCL14O95715 111 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 ALDH2P05091 517 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 ITGA4P13612 1032 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 HOXB8P17481 243 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-208ENST00000422080 RBM10P98175 930 aaKnown RBP19.71■□□□□ 0.75
HDLBP-208ENST00000422080 GIT2Q14161 759 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 HAUS3Q68CZ6 603 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 ANKRD54Q6NXT1 300 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 TMEM173Q86WV6 379 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-208ENST00000422080 ZNF280BQ86YH2 543 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 VPS52Q8N1B4 723 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 TMEM175Q9BSA9 504 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
HDLBP-208ENST00000422080 USP15Q9Y4E8 981 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-208ENST00000422080 IPPQ9Y573 584 aa19.71■□□□□ 0.75
HDLBP-208ENST00000422080 INPPL1O15357 1258 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 DCXO43602 365 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 CTSAP10619 480 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 SLC11A1P49279 550 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 TOB1P50616 345 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-208ENST00000422080 PDIA5Q14554 519 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 SUSD6Q92537 303 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 CPB2Q96IY4 423 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 FAM193BQ96PV7 902 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-208ENST00000422080 EIF2AQ9BY44 585 aaKnown RBP19.7■□□□□ 0.74
HDLBP-208ENST00000422080 GBP3Q9H0R5 595 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 ZBP1Q9H171 429 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 S1PR5Q9H228 398 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 C11orf16Q9NQ32 467 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 DNAJB4Q9UDY4 337 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 IRAK3Q9Y616 596 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 STK24Q9Y6E0 443 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 ATG2AQ2TAZ0 1938 aa19.7■□□□□ 0.74
HDLBP-208ENST00000422080 PLXNA4Q9HCM2 1894 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 ARHGEF35A5YM69 484 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 DDHD2O94830 711 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 ARF4P18085 180 aaPredicted RBP19.69■□□□□ 0.74
HDLBP-208ENST00000422080 CYP11B2P19099 503 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 AFF1P51825 1210 aaKnown RBP19.69■□□□□ 0.74
HDLBP-208ENST00000422080 SYCE2Q6PIF2 218 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 PADI6Q6TGC4 694 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 MAEAQ7L5Y9 396 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 HACE1Q8IYU2 909 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 CASP10Q92851 521 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 LRWD1Q9UFC0 647 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 GIT1Q9Y2X7 761 aa19.69■□□□□ 0.74
HDLBP-208ENST00000422080 A0A1B0GUA9 196 aa19.68■□□□□ 0.74
HDLBP-208ENST00000422080 LRRIQ4A6NIV6 560 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms