RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 HOXD13P35453 343 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 STRN3Q13033 797 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 GPNMBQ14956 572 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 DPCR1Q3MIW9 517 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.35
DDX55-203ENST00000421670 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 MAP4K3Q8IVH8 894 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 FZD8Q9H461 694 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 TMEM134Q9H6X4 195 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 PRMT7Q9NVM4 692 aaPredicted RBP17.27■□□□□ 0.35
DDX55-203ENST00000421670 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 TSPAN1O60635 241 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 CAPN15O75808 1086 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 ERLIN2O94905 339 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
DDX55-203ENST00000421670 PRCPP42785 496 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 PAK2Q13177 524 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 ALCAMQ13740 583 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 DEFB128Q7Z7B8 93 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 MYOCDQ8IZQ8 938 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 CPB2Q96IY4 423 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
DDX55-203ENST00000421670 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
DDX55-203ENST00000421670 UBE4BO95155 1302 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 CNTNAP2Q9UHC6 1331 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 TISP43B9A030 160 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 HNRNPDLO14979 420 aaKnown RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 NLRP12P59046 1061 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 NFX1Q12986 1120 aaKnown RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 PRPF4BQ13523 1007 aaKnown RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 CDR2LQ86X02 465 aaPredicted RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 KCNN1Q92952 543 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 HVCN1Q96D96 273 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 BICD1Q96G01 975 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 ACCSQ96QU6 501 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 ST3GAL5Q9UNP4 418 aa17.25■□□□□ 0.35
DDX55-203ENST00000421670 PIN4Q9Y237 131 aaKnown RBP17.25■□□□□ 0.35
DDX55-203ENST00000421670 ACKR2O00590 384 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 LETM1O95202 739 aaPredicted RBP17.24■□□□□ 0.35
DDX55-203ENST00000421670 CSF2RAP15509 400 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 ARF4P18085 180 aaPredicted RBP17.24■□□□□ 0.35
DDX55-203ENST00000421670 SCP2P22307 547 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 TYRO3Q06418 890 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 FAM187BQ17R55 369 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 TMEM132AQ24JP5 1023 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 GUF1Q8N442 669 aaKnown RBP17.24■□□□□ 0.35
DDX55-203ENST00000421670 USP38Q8NB14 1042 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 PRIMPOLQ96LW4 560 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
DDX55-203ENST00000421670 MRPL4Q9BYD3 311 aaKnown RBP17.24■□□□□ 0.35
DDX55-203ENST00000421670 ERVK-5Q9HDB9 667 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 AGPAT5Q9NUQ2 364 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
DDX55-203ENST00000421670 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ABCD1P33897 745 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 STX1AQ16623 288 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 KLHL10Q6JEL2 608 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 SLC39A4Q6P5W5 647 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 BADQ92934 168 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ANKFY1Q9P2R3 1169 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 PDE4DIPQ5VU43 2346 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 CITO14578 2027 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ANKRD63C9JTQ0 380 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 GPR182O15218 404 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 CXCL10P02778 98 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
DDX55-203ENST00000421670 LIG4P49917 911 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 KNOP1Q1ED39 458 aaKnown RBP17.23■□□□□ 0.35
DDX55-203ENST00000421670 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 PLEKHG4Q58EX7 1191 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ATF7IP2Q5U623 682 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 TMEM199Q8N511 208 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 VWCEQ96DN2 955 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 ACO2Q99798 780 aaKnown RBP17.23■□□□□ 0.35
DDX55-203ENST00000421670 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
DDX55-203ENST00000421670 KCTD10Q9H3F6 313 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
DDX55-203ENST00000421670 TRIP11Q15643 1979 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 ANK1P16157 1881 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 MGEA5O60502 916 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 PARNO95453 639 aaKnown RBP17.22■□□□□ 0.35
DDX55-203ENST00000421670 RFC2P35250 354 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 STIM1Q13586 685 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX55-203ENST00000421670 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
DDX55-203ENST00000421670 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms