RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PSAPP07602 524 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 ACOT2P49753 483 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 NCKAP1LP55160 1127 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 ZBTB41Q5SVQ8 909 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 STK33Q9BYT3 514 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 SPATC1LQ9H0A9 340 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 POLR3FQ9H1D9 316 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 ASCC2Q9H1I8 757 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 PDE11AQ9HCR9 933 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 RAB21Q9UL25 225 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 KCNK3O14649 394 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 ATMINO43313 823 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 ARIH2O95376 493 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 EDN1P05305 212 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 GJB1P08034 283 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 FDX1P10109 184 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 ALDH5A1P51649 535 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 SMTNP53814 917 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 OAZ1P54368 228 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 IRX3P78415 501 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 TUBB2AQ13885 445 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 SMC1AQ14683 1233 aaKnown RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 SLC9A9Q8IVB4 645 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 TAS1R2Q8TE23 839 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 COPS5Q92905 334 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 ATP6V0A1Q93050 837 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 ARHGEF26Q96DR7 871 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 TUBB2BQ9BVA1 445 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 ANKEF1Q9NU02 776 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 L1RE1Q9UN81 338 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 PARP14Q460N5 1801 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 CYP2C8P10632 490 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 LLGL1Q15334 1064 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 GNPTABQ3T906 1256 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 GJC2Q5T442 439 aaPredicted RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 INTS8Q75QN2 995 aaKnown RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 OTUD6AQ7L8S5 288 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 ADAT2Q7Z6V5 191 aaKnown RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 PHLDB2Q86SQ0 1253 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 SLC47A2Q86VL8 602 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 TATDN2Q93075 761 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 THAP2Q9H0W7 228 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 SYNGAP1Q96PV0 1343 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 LRRIQ4A6NIV6 560 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 POTEB2H3BUK9 544 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 ATP2A1O14983 1001 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 CYP26A1O43174 497 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 SGPL1O95470 568 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 MAPTP10636 758 aaKnown RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 PRKCIP41743 596 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 TNNT3P45378 269 aaPredicted RBP9.54□□□□□ -0.88
SNCA-206ENST00000420646 MXI1P50539 228 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 BRD3Q15059 726 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 NFIL3Q16649 462 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 HSDL1Q3SXM5 330 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 C2CD6Q53TS8 623 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 CPNE8Q86YQ8 564 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 GOLGA5Q8TBA6 731 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 ASAP3Q8TDY4 903 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 KREMEN1Q96MU8 473 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 PCYT2Q99447 389 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 AP1M1Q9BXS5 423 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 HAPLN2Q9GZV7 340 aa9.54□□□□□ -0.88
SNCA-206ENST00000420646 EIF3JO75822 258 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 CLSTN1O94985 981 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 H2AFZP0C0S5 128 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SUPT20HL2P0C7V6 817 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 OAS2P29728 719 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 CASP8Q14790 479 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 NOL9Q5SY16 702 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 H2AFVQ71UI9 128 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 DAAM2Q86T65 1068 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 CDR2LQ86X02 465 aaPredicted RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 TMEM130Q8N3G9 435 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 RNF10Q8N5U6 811 aaKnown RBP9.53□□□□□ -0.88
SNCA-206ENST00000420646 TRAPPC12Q8WVT3 735 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 CDCA5Q96FF9 252 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PDLIM7Q9NR12 457 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 ANKFY1Q9P2R3 1169 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 PCDHGC5Q9Y5F6 944 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 UBE4BO95155 1302 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 GSTTP1A0A1W2PQM5 241 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 GGPS1O95749 300 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 EMC2Q15006 297 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SH3D19Q5HYK7 790 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SPOPLQ6IQ16 392 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 MAP4K3Q8IVH8 894 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 KLHL7Q8IXQ5 586 aa9.53□□□□□ -0.88
SNCA-206ENST00000420646 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms