RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 RNF20Q5VTR2 975 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 B3GNT9Q6UX72 402 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 AGMOQ6ZNB7 445 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 RDM1Q8NG50 284 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 SEPT9Q9UHD8 586 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 WDR87Q6ZQQ6 2873 aa11.48□□□□□ -0.57
TNFAIP3-202ENST00000420009 CLUHO75153 1309 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 CHMP2AO43633 222 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 DDHD2O94830 711 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 CFHP08603 1231 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 GNA11P29992 359 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 MTERF2Q49AM1 385 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 LRCH2Q5VUJ6 765 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 RSAD2Q8WXG1 361 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 TMEM175Q9BSA9 504 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 INO80BQ9C086 356 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 MAN1C1Q9NR34 630 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 MRPL17Q9NRX2 175 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 PCDHB2Q9Y5E7 798 aa11.47□□□□□ -0.57
TNFAIP3-202ENST00000420009 OTOGLQ3ZCN5 2332 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 CNTNAP2Q9UHC6 1331 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 PSMD10O75832 226 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 EFEMP2O95967 443 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 SOD2P04179 222 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 SSBP05455 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 SRFP11831 508 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 DNM2P50570 870 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 CATSPER4Q7RTX7 472 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 MRPL10Q7Z7H8 261 aaKnown RBP11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 RHPN2Q8IUC4 686 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 URGCPQ8TCY9 931 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 BICD2Q8TD16 824 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 GJA10Q969M2 543 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 NXPE3Q969Y0 559 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 PGBD4Q96DM1 585 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 TBC1D17Q9HA65 648 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 IFT122Q9HBG6 1241 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 MARCH5Q9NX47 278 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 DLGAP2Q9P1A6 1054 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 R4GN57 208 aa11.46□□□□□ -0.57
TNFAIP3-202ENST00000420009 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 NRP1O14786 923 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 INPPL1O15357 1258 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 TEX28O15482 410 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 PRPF3O43395 683 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 MAFO75444 373 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 URODP06132 367 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 ADH1AP07327 375 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 GBP2P32456 591 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 USP11P51784 963 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 NONOQ15233 471 aaKnown RBP eCLIP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 UBXN11Q5T124 520 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 ANO5Q75V66 913 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 MIER3Q7Z3K6 550 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 SLC44A3Q8N4M1 653 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 CCDC148Q8NFR7 591 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 KCNG4Q8TDN1 519 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 STAMQ92783 540 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 ZNF707Q96C28 371 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 MYADMQ96S97 322 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 RXFP1Q9HBX9 757 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 KANSL3Q9P2N6 904 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 CA14Q9ULX7 337 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 NCOR2Q9Y618 2525 aa11.45□□□□□ -0.58
TNFAIP3-202ENST00000420009 DOCK8Q8NF50 2099 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 C2CD2LO14523 706 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 RFPL2O75678 378 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 GLUD1P00367 558 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 ALDH2P05091 517 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 HOXA11P31270 313 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 AK2P54819 239 aa11.44□□□□□ -0.58
TNFAIP3-202ENST00000420009 DSC1Q08554 894 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms